Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1849 |
Symbol | |
ID | 5662244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 2247286 |
End bp | 2250600 |
Gene Length | 3315 bp |
Protein Length | 1104 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641236439 |
Product | hypothetical protein |
Protein accession | YP_001501707 |
Protein GI | 157961673 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTCACAGG CAGTAAACAG AAACTGGAGA CAAAAAGCCC CGCGCTTTAT ATTATTCTCA TGCCTTGGCT TGATTGCTCT TGTGACTGTG GTTGCAGGCA TAGCGCTTTG GCATTATGAG CGACTCACTA TCCATTTCGC CAATCAATTT CTAGTGCCTT ATCAGACTCA AATTCACTCC CTCAAATTTA AGCCTATCAG GCTAAGTCAG TGGCAAGTTT CACAAGCTGA ATTAACGATA CACGACACTG ATATTACAAT CTCTGGACTC AATCTCTTAT TCGATGAAAA TACTAAACCT TGGGCGTTTC AGGTTAGCGA TCTCCTCGCG TTGTCTGTGG CAAATATAGA GGTAAAACTG GCGCCCAGTG CATTAAAAGC ATCGAGCCAA AATAGCAATG AAACTGGCCC GACTATCGGC CTCAACTTTG ATGCATTCCC CGAGATCAGG CTCGATAACA TCCGTATAGC CATTAAAGGT CTTGAAGATA GCGCGCCAAC GCTTGAGCTT GAACAGCTAA GTTTAAACAG GCTCGGTGAG CTAAAAAGCC TGCTTAAGGT TGATCACAAG CCTCTGCTCG ATTTATCGGC TGAGCTCAAT CAAAAACAAT GGCATACATC AACTAAGATT GACTTAACTT TGTTGCAATC TTTTAGTCGT CGATTAGCCG CAGTAGAGCA AAGCCTCGAT GCCAATCAGT CTGCTAATGC CATCGATTCA AATATGAGCC TATTGGCGCC GCTATATCGA TTGACTCAGA TGTTAGATGA TAAGCACGTC CTGCTCGATG CCACACTCGA CTCGGCGGCG ACACTCGACT TAAAAACCGC AGAACTGACC TCTCACCATA ATTTGCAAGG CACCCGCTTA GTGTTAAATG ATTATGCCAA ACTTATCTTG CAGCCCATTA GCCTTAGCGA CAGTGTACAG CCATTAGGCA GGCTAGATTT CGAGGTCAAC GGCCATCTTG CCACGCCAAA GTTAACGGTT TTACCCTTCG AGTTGCCAGT CGCCTTAGAG AATAACCTCA ATGCTGACGC TAACTTAAAT TCAAGTATAA ACAGCGATAA GCAACTTACA CGGCTACTCT CGTTAGTCGA TGACAAACCG TTCGAGCAAG CGCTGAGCCA ACTATATGAG CAGCTAAGCC TCACTAGCGG CAAAGTTACA GCTACAGTTA ATCCCAGAGG TAAAACCAAA GAAAAACAGA CGCAACAAAA ACCAAGCCTA TTACTTAGCT TCGATGAGGG CTTAAGCTAT CAAATCGACC AGGAGGCACT GTCTATACCC AAACTGTCAC TGGCATTACT AAACAGTAAA CTCGAAGCCA AACTATTAGT TTCGTCACTA AGCTATCAAA CCTTTACGGC AGATGGATCA CCGCAAGCAC AAACTAACAG CCAAATACAC AAGCAAGTAG CTAACTATTA CCAGCTAAAC GCCAACTGGC AGCTCAAGGC GGCACATCAA CAATCTATAA CCCTCAACCG TTTGTGGCCT AAGTTAGCTG AGCTGCCTTA CCTTATTGAG ATAGATAAAG CCTCATTAAA CATTGAGGGA AAGCTCGCCT TTAACCAGAC ACAACAGCAA ACAAGCTATA GCATCTCAAT CGCAAGTGGC GCCTCGCAGC AAGCCGAAGG CATCAAGATC AGTAGCCAAG TACAAGCTGC CAGCACGACT ATCGCCCCCT CACACCTAGA AAGTGAAATC GGCCAGACAG AGCTCTCTAT CGACTCTCCT ATTGAGTACC AGTTCCTGCA AGGGCAAACT CTGCTCACCA TCCCAGCCCT TAGCTATCAA GTCACCGGCG TCGATGGCAA TTTACAGCTG CATAACGCCC TTGAAGAAAA CTATAAACTG TGGCTCGATA ACGCTGACAT CAAGCTTAAG CAGGCTATCC CGTTAATATT TGATTCAAAA GGAAAAGATA GCGCTAATGC CGACTCATCA TTTGTGTCAC AGCTTCTCAA CCACACACTT AGCAATGAGA TTCATATCAG CCTTGCACAA TTGACCCTAG ACAAATCAGG ATATAACCGA GCTAGCCAAT CGAGCAGCGC TAAAGCCGAT ACTAGAGTCA GTAAACACAA GAGGCGCCTG ATCAAGCAAA AGCTGGCTCA GTTTGAGTCC ATAGACTTAA ATCAAAAACT CCAGCTTAAA CAGCAGCGCA TTAACAGTGA TGAAAATTGG AAGATCAATG ATCTCTTCCT CAGCAGCCAG CATCAATTCG CGCCTGAGCT CAATAATCGA TTCGATGACT TGAGCCGCTT TAAATTAACG GGGGACTGGC AGTTTAGTAG TGAATTTGCG CCAATCTTGG CGTTTTTAAG CCAAACCGAC AGTTTGCCTG ACTCACTGGA TATTAAGGGG AATGCCGACT TAACCATGCA TTACCAACTT AATAGAGACC AAAAGCTGGC GTTCAATTTA ACACTGGATC CAAAGGTTAG TGATATTCAA GGTAGCCTTA ACAACCTGCC CTTCGATGGT GGCAATATGG ACACCCAGTG CCAATTTGAC TGGCTGCAAG ATAGCGCCAA TAAGCGCGAG AGCGCATTTA ACTGCGACAA TATCAGCCTT TCTTTAAAAG CCTTTAACCC TGGCGTACTG ATCACCGATA TCAACGCAGA AGCCGCAATA TCTTTCGCCA CCCAGTCCGC CTCAGAAGCG AATAATGAGC TAGTGAATGA GCAAGAGATT GAGTTAACTA ATAAGGATAA AGAAGCGCAG AACTTGGCTT TAGCGCAACA GCTGCTAGGC ATAAAACAGG CATCTATTGG ATTAACAGCC CAAGGCAATT TGTTGGGTGG CCAGTTATTA ATTCCACAGT TTCAGCTAAA CCTTAAAAAC CCCTCATCGG CTTATTTTGT ACTACAGCAA ATTGATCTAG AACAGCTGCT AGCAATCCAA CCCCAAGTGG GGATCTACGC CGATGGTATT TTCGATGGCG TACTGCCGGT TAATATAGAA AAAGGCAAAG CCAGTATCAC AGGAGGTCGG CTCGCAGCGC GAGCCCCTGG CGGCCTAATC GCCATAGGTA ACAACCCTGC CGTTGAACAG ATGCGCCAGA GCCAACCTTA TCTAGAATTC GCTTTCTCCG CTCTGGAACA TTTAAACTAT TCAGAACTTT CAAGTAGTTT TGATATGGAT GCTCAGGGCG ATGCTGTATT AAAGGTTAAT GTAAAAGGAC GCAGCCGAGG TATTGAACGA CCTATTCACT TCAACTACTC TCAAGAGGAG AACATGTTAC AGTTACTTAG AAGTTTACAG ATAGGCGATA ATTTACAGGA TCAGATAGAG CGAGCGGTAA ACTAA
|
Protein sequence | MSQAVNRNWR QKAPRFILFS CLGLIALVTV VAGIALWHYE RLTIHFANQF LVPYQTQIHS LKFKPIRLSQ WQVSQAELTI HDTDITISGL NLLFDENTKP WAFQVSDLLA LSVANIEVKL APSALKASSQ NSNETGPTIG LNFDAFPEIR LDNIRIAIKG LEDSAPTLEL EQLSLNRLGE LKSLLKVDHK PLLDLSAELN QKQWHTSTKI DLTLLQSFSR RLAAVEQSLD ANQSANAIDS NMSLLAPLYR LTQMLDDKHV LLDATLDSAA TLDLKTAELT SHHNLQGTRL VLNDYAKLIL QPISLSDSVQ PLGRLDFEVN GHLATPKLTV LPFELPVALE NNLNADANLN SSINSDKQLT RLLSLVDDKP FEQALSQLYE QLSLTSGKVT ATVNPRGKTK EKQTQQKPSL LLSFDEGLSY QIDQEALSIP KLSLALLNSK LEAKLLVSSL SYQTFTADGS PQAQTNSQIH KQVANYYQLN ANWQLKAAHQ QSITLNRLWP KLAELPYLIE IDKASLNIEG KLAFNQTQQQ TSYSISIASG ASQQAEGIKI SSQVQAASTT IAPSHLESEI GQTELSIDSP IEYQFLQGQT LLTIPALSYQ VTGVDGNLQL HNALEENYKL WLDNADIKLK QAIPLIFDSK GKDSANADSS FVSQLLNHTL SNEIHISLAQ LTLDKSGYNR ASQSSSAKAD TRVSKHKRRL IKQKLAQFES IDLNQKLQLK QQRINSDENW KINDLFLSSQ HQFAPELNNR FDDLSRFKLT GDWQFSSEFA PILAFLSQTD SLPDSLDIKG NADLTMHYQL NRDQKLAFNL TLDPKVSDIQ GSLNNLPFDG GNMDTQCQFD WLQDSANKRE SAFNCDNISL SLKAFNPGVL ITDINAEAAI SFATQSASEA NNELVNEQEI ELTNKDKEAQ NLALAQQLLG IKQASIGLTA QGNLLGGQLL IPQFQLNLKN PSSAYFVLQQ IDLEQLLAIQ PQVGIYADGI FDGVLPVNIE KGKASITGGR LAARAPGGLI AIGNNPAVEQ MRQSQPYLEF AFSALEHLNY SELSSSFDMD AQGDAVLKVN VKGRSRGIER PIHFNYSQEE NMLQLLRSLQ IGDNLQDQIE RAVN
|
| |