Gene Spea_1824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1824 
Symbol 
ID5662219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp2224584 
End bp2224940 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content44% 
IMG OID641236414 
Producthistidine triad (HIT) protein 
Protein accessionYP_001501682 
Protein GI157961648 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.000876715 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGAAG AAACCATATT TAGCAAAATT ATTCGACGTG AAATTCCAGC GGATATCCTG 
TATCAAGACG ATCTTGTTAC CGCTTTTAGA GATATCACAC CTAAAGCGCC AACCCATGTA 
TTAATTATTC CTAATCATTT GATCCCAACT ACAAACGATA TCAAGGCATC TGATGAAAAA 
GCATTAGGGC GTATGATGTC TGTGGCAGCT AAATTGGCAC AAGAAGCGGG CATAGCTGAA 
GATGGCTATC GCTTGATCAT GAACTGTAAT CAGCACGCTG GACAGGAAGT GTTCCATATC 
CACATGCATT TACTCGGTGG TCAGCCATTA GGCCCAATGC TGAGCCCTGG TGCATGA
 
Protein sequence
MAEETIFSKI IRREIPADIL YQDDLVTAFR DITPKAPTHV LIIPNHLIPT TNDIKASDEK 
ALGRMMSVAA KLAQEAGIAE DGYRLIMNCN QHAGQEVFHI HMHLLGGQPL GPMLSPGA