Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1811 |
Symbol | |
ID | 5662206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2212030 |
End bp | 2214699 |
Gene Length | 2670 bp |
Protein Length | 889 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641236401 |
Product | nitrite reductase (NAD(P)H), large subunit |
Protein accession | YP_001501669 |
Protein GI | 157961635 |
COG category | [C] Energy production and conversion |
COG ID | [COG1251] NAD(P)H-nitrite reductase |
TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.603082 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAGC TAGAGCAAGA AACAAAGAAA AAAACTATAC CCAATCAAGA CGTAAAGCAG AAACTCGTGA TTGTGGGTAA CGGCATGGTT GGTCACTACT TTATAGAGCA ATTGTGCGAA CAAAAATTAA CTGAACATTT TGATATTCAG GTATTGGGCG AAGAGCACAT TGCTGCCTAC GACCGTGTTC AACTCTCTAA GTATTTTGAA ACGGGCAATG TTAAAAGTTT GATGTTGGCA AGCGAGCAGG CTTATGCCGA GCAAGGAGTC AGTTTACTCT TAGGCCATAA GGTAACCCAG ATAGATATCG ACAATAATCT ATTGCATACA GAGCAGGGCT GTTTTGCCTA TGACAAACTG GTTTTAGCAA CGGGTTCTTA CCCCTTTGTG CCACCTATTC CTGGTAAGGA TAGGCAAGGT TGCTTGGTGT ATCGCACCAT AGATGATCTT GAAGCGATTT CGCAAGCAGC AACCGGTGCC AAATCCGGTG TTGTTATTGG AGGCGGACTA CTTGGACTTG AAGCGGCGAA TGCCCTTAAA TCATTAAACT TGGACACCCA TGTAGTTGAA TTTGCACCAC AGCTGATGTC TGTACAATTG AATGATAAAG CGGGCTTGTT ACTAAAGCAG AAAATCGAAG CTTTAGGCGT AACAGTGCAT GTCAGCAAGG CAACCACAGA GATTGTCGAT GGCGAGACTG CTAAGCATAG AATGAATTTC AGTGATGGCA GCTACCTTGA AGCCGATATG TTGGTATTTT CAGCAGGGAT CCGTCCCCAA GATGAGCTAG CAAGAAGTGG TGGAATAGAC ATAGGGACGC GGGGTGGCAT AGTGATTGAT AACCACTGTC AAACTTCGGT GGATAACATC TATGCCATTG GGGAATGCGC ATTGTGGCAG CAGAAAATAT TCGGCCTAGT CGCTCCCGGT TACCAGATGG CAAATGTTGT TGTATCTGCA TTGCAAGAAG ACTATCACAT TAGTAAGACC TCAATAACAC AGAGCCAGAA GCAGTTTACT GGGGCAGATA TGAGCACCAA ACTCAAATTA TTAGGTGTTG ATGTGGCAGC GATTGGTGAA AGCCGAGGTT TTGAAGGTGC TCAATATGTC GAATTAAACG ATGAGCAGTC TGGCGTTTAC AAAAAACTTT GGTTAGACGA AACGGGGATG TACTTAAAAG GCGCAGTCTT GGTGGGGGAT GTTGAAGAAT ACAGTGCCCT GCTTAATATC TATTTATCCG CAGAGCCTTT ACTCGCACCC GCTGTAACGC TTCTCGTTGC TGATAATGAA ATGCCGCAAG TGCTCAACGA TAAGGCGATT GTTTGCTCGT GTCACCAAGT CACTAAGGCT GAGATTGTTG CGCAAGTTGT CGATGGTAAA CATACGATAG CAGATATTAA GGTTTGCACT AAAGCCGCTT CAGGCTGTGG CGGTTGTGCC AGCCTAGTGC AGCAAGTAAT AGATGAAACC CTGTTAGAGC AAGGGCAGGA GGTTGAAAAG GGGATTTGTT GCCATTTTGA ATATGACAGG CAATCTTTGT TTCATTTGTG CCAGGTTGAG AGCATAAAAG ATTTTAATGA GCTCTACCAA AGGCACGCGA GATCTGGTGC TTCCTCCCTC GCGATAGGCT GCGAGATCTG TAAACCTCTG GCGGCGTCCA TTTTTGCCAC ATTAGAAAAT GAATATGTAC TTTTAGAGCA ACATGTGGCG CTACAAGATA CCAATGATGC CTACTTAGGC AACCTGCAAA AAGATGGTAG TTACTCTGTC GTGCCACGCA TAGCAGGTGG AGAGATCACC CCTGATAAAC TTATCGCAAT TGGCCATATT GCTAAACGCT ATGATCTTTA CACCAAAATC ACCGGCGGGC AGCGTATCGA TATGTTTGGT GCTCAGTTGT CGAGCTTACC TCAGATCTGG ACCGATTTGA TTGATGCGGG TTTTGAAACG GGCCACGCCT ATGGTAAATC CCTTCGCACG GTAAAGTCCT GTGTTGGCAG TACCTGGTGC CGTTATGGTG TGCAAGATTC AGTAAGTTTA GCGATTGCCC TTGAAAACCG ATACAAGGGG TTACGTGCCC CCCATAAAAT TAAGATGGCA GTATCGGGCT GCACCAGAGA GTGCGCTGAA GCACAGAGCA AAGATATCGG TGTTATCGCC TCAGATAAAG GCTGGAACCT TTATGTTTGT GGCAATGGCG GCATGCGGCC TCGCCATGGC GAGCTGTTTG CAACCGATTT GAGCACAGAG CAGTTAGTCA GTTATATCGA TCGAATATTG ATGTTTTACA GCAAAACCGC AGCACGTTTA CAGCGAACTT CAGTGTGGAT TGAGTCATTA GCCGGCGGAC TTGAATACCT ACAAGCGGTG GTGATTGACG ATAGTTTGGA TATTGTCGAT GAGCTTGAAA CACAGATGCA AAAAATCGTT AGCCACTACC AGTGTGAGTG GAAAACTAGT TTGACTGACG AGCAATTTTT AAGTCGCTTT AATGAATACG TTAACCCCGA AGCGGCTCCT GAAAGTGAAG AGCGCAGCTA TCAATATCAG CGTGAGCAGA AGTTTCCAAT CCAATCCCAA GTCGATACAT TTCATGCGAT TTCTAAGCCT CAGTATGGCG CTGGGGATAT CGCAATCAAT ATTATTGATG AGCAGGAGGT CATGGTATGA
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Protein sequence | MNKLEQETKK KTIPNQDVKQ KLVIVGNGMV GHYFIEQLCE QKLTEHFDIQ VLGEEHIAAY DRVQLSKYFE TGNVKSLMLA SEQAYAEQGV SLLLGHKVTQ IDIDNNLLHT EQGCFAYDKL VLATGSYPFV PPIPGKDRQG CLVYRTIDDL EAISQAATGA KSGVVIGGGL LGLEAANALK SLNLDTHVVE FAPQLMSVQL NDKAGLLLKQ KIEALGVTVH VSKATTEIVD GETAKHRMNF SDGSYLEADM LVFSAGIRPQ DELARSGGID IGTRGGIVID NHCQTSVDNI YAIGECALWQ QKIFGLVAPG YQMANVVVSA LQEDYHISKT SITQSQKQFT GADMSTKLKL LGVDVAAIGE SRGFEGAQYV ELNDEQSGVY KKLWLDETGM YLKGAVLVGD VEEYSALLNI YLSAEPLLAP AVTLLVADNE MPQVLNDKAI VCSCHQVTKA EIVAQVVDGK HTIADIKVCT KAASGCGGCA SLVQQVIDET LLEQGQEVEK GICCHFEYDR QSLFHLCQVE SIKDFNELYQ RHARSGASSL AIGCEICKPL AASIFATLEN EYVLLEQHVA LQDTNDAYLG NLQKDGSYSV VPRIAGGEIT PDKLIAIGHI AKRYDLYTKI TGGQRIDMFG AQLSSLPQIW TDLIDAGFET GHAYGKSLRT VKSCVGSTWC RYGVQDSVSL AIALENRYKG LRAPHKIKMA VSGCTRECAE AQSKDIGVIA SDKGWNLYVC GNGGMRPRHG ELFATDLSTE QLVSYIDRIL MFYSKTAARL QRTSVWIESL AGGLEYLQAV VIDDSLDIVD ELETQMQKIV SHYQCEWKTS LTDEQFLSRF NEYVNPEAAP ESEERSYQYQ REQKFPIQSQ VDTFHAISKP QYGAGDIAIN IIDEQEVMV
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