Gene Spea_1804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1804 
Symbol 
ID5662199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp2203089 
End bp2203754 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content45% 
IMG OID641236394 
Productdethiobiotin synthase 
Protein accessionYP_001501662 
Protein GI157961628 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0132] Dethiobiotin synthetase 
TIGRFAM ID[TIGR00347] dethiobiotin synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.511205 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTTT TTGTAACGGG TACAGATACC GACTGTGGTA AGACGTTGAT CTCTTCTGCA 
TTGTTAGCAG CAGCAAAAGG CGAGACAGTA GGCTTTAAGC CAATAGCTTC TGGTTGCGAA 
CAAACCGAGA ATGGTCTTAG AAACAGCGAT GCGCTTGCAT TGATGGCAGC ATCGAGTATT 
AAGCTACCTT ACGAGGATAT CAATCCTTTT GCTTTTGAGC CTGCGATTGC GCCGCACTTA 
GCTGCAGCTG AGAAAGGTGT AAATTTGGCG CCTAATCGTA TCGAAGCCCA GTTAAAAATG 
GCTGAATATG TGGGGGCAGA TTTTTGCTTA ATTGAAGGCG CTGGTGGTTG GCGTCTACCG 
TTAGGAGAAG GGCATTTCCT TTCTGATGTG GTCCAGTCGA TGCAGTTACC GGTAATTTTA 
GTTGTCGGCA TGAAATTGGG TTGTTTGAAC CATGCGCTAT TAACGGCACA AGCGATAAAA 
GCCGATGGCT TAAACATTGT AGGCTGGGTA GCTAATCAAG TGGATAAAGA TATGGCCTAT 
CAAGAGCAAA ACCTAGAGAG CTTAAAAGCT TTATTGCCAG CGCCTTGTTT AGGCTATGTT 
CCTTATCTTG CCGAGGCAAC AGCCGAAGCT GCGGCTAGCC ATTTAGATCT AACATTATTA 
GCCTAA
 
Protein sequence
MTFFVTGTDT DCGKTLISSA LLAAAKGETV GFKPIASGCE QTENGLRNSD ALALMAASSI 
KLPYEDINPF AFEPAIAPHL AAAEKGVNLA PNRIEAQLKM AEYVGADFCL IEGAGGWRLP 
LGEGHFLSDV VQSMQLPVIL VVGMKLGCLN HALLTAQAIK ADGLNIVGWV ANQVDKDMAY 
QEQNLESLKA LLPAPCLGYV PYLAEATAEA AASHLDLTLL A