Gene Spea_1790 details

Gene Information

• Locus tag: Spea_1790
• Symbol: sucC
• ID: 5662185
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 2186757
• End bp: 2187923
• Gene Length: 1167 bp
• Protein Length: 388 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 641236380
• Product: succinyl-CoA synthetase subunit beta
• Protein accession: YP_001501648
• Protein GI: 157961614
• COG category: [C] Energy production and conversion
• COG ID: [COG0045] Succinyl-CoA synthetase, beta subunit
• TIGRFAM ID: [TIGR01016] succinyl-CoA synthetase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTTGC ATGAATATCA GGCAAAAGCC CTATTTGCCG AATATGGTTT ACCAGTGTCA 
GAAGGTTTTG CATGTGATAC TGCCCAAGAA GCAGTTGAAG CAGCAGGCCA TATTGGCGGT 
GATATGTGGG TTGTTAAGTG TCAAGTACAC GCTGGCGGCC GTGGTAAAGC GGGTGGCGTT 
AAAGTCACTG GCGACAAAGA AGAGATCAGA GCATTTGCTG AGCATTGGTT AGGTAAGAAC 
CTTGTTACTT ATCAGACTGA TGAGAAAGGT CAGCCAGTTG CTAAAATTTT AGTAGAAAGC 
TGTACTGATA TCGCAAATGA ATTGTACCTA GGTGCAGTAG TCGATCGCTC AACACGTCGC 
GTTGTGTTTA TGGCATCGAC TGAAGGCGGT GTGGAAATTG AAACTGTGGC CGAAGAAACG 
CCAGAGTTGA TCCACAAAGC TATCATCGAT CCGCTTACAG GCCCTCAGCC ATACCAAGCT 
CGCGATCTTG GCTTCAAGTT AGGTCTTAAC CCAACACAAA TGAAGCAATT CACTAAAGTC 
TTTATGGGCT TAGCGAAAAT GTTTGAAGAT CATGATTTTG CTCTACTTGA AATCAACCCA 
CTTGTTATCA CTGACGAAGG CAACATTCAC TGTCTTGATG GCAAGATTGG TATCGATGGC 
AACGCTTTAT TCCGTCAGCC TAAGATCCGT GATATGCACG ATCCATCACA AGATGATGCT 
CGTGAAGCGC ACGCGGCTAA GTTCGAGCTT AACTATGTAG CACTAGACGG AAACGTTGGC 
TGCATGGTGA ATGGTGCAGG CCTAGCGATG GGCACTATGG ATATCGTTAA CCTACACGGT 
GGCAAGCCAG CTAACTTCTT AGACGTTGGT GGTGGAGCAA CTAAAGAGCG AGTAGCTGAA 
GCATTCAAGA TCATCTTGTC TGATTCAAAC GTTAAAGCGG TTCTTGTGAA CATCTTTGGT 
GGCATCGTTC GTTGTGACAT GATTGCTGAA GGTATCATCG GTGCAGTTAA AGAAGTGGGT 
GTTGAAGTAC CAGTTGTTGT TCGTCTTGAA GGTACTAACG CCGACCTAGG TCGTGAAGTT 
CTAGCTAACT CTGACCTTGA TATCATCGCT GCTACAAGTC TAACTGACGC GGCTGAGCAA 
GTAGTTAAAG CTGCGGAGGG CAAATAA 

 

Protein sequence

MNLHEYQAKA LFAEYGLPVS EGFACDTAQE AVEAAGHIGG DMWVVKCQVH AGGRGKAGGV 
KVTGDKEEIR AFAEHWLGKN LVTYQTDEKG QPVAKILVES CTDIANELYL GAVVDRSTRR 
VVFMASTEGG VEIETVAEET PELIHKAIID PLTGPQPYQA RDLGFKLGLN PTQMKQFTKV 
FMGLAKMFED HDFALLEINP LVITDEGNIH CLDGKIGIDG NALFRQPKIR DMHDPSQDDA 
REAHAAKFEL NYVALDGNVG CMVNGAGLAM GTMDIVNLHG GKPANFLDVG GGATKERVAE 
AFKIILSDSN VKAVLVNIFG GIVRCDMIAE GIIGAVKEVG VEVPVVVRLE GTNADLGREV 
LANSDLDIIA ATSLTDAAEQ VVKAAEGK