| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1784 |
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| Symbol | |
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| ID | 5662179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2179217 |
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| End bp | 2179591 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641236374 |
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| Product | succinate dehydrogenase cytochrome b556 subunit |
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| Protein accession | YP_001501642 |
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| Protein GI | 157961608 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit |
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| TIGRFAM ID | [TIGR02970] succinate dehydrogenase, cytochrome b556 subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000397756 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAAAAGC AAAGACCTGT CCATTTAGAT CTGCAGACCA TACGCTTCCC TGCAACGGCG
ATCGCGTCCA TTCTTCACCG TGTATCGGGT GTCATCATGC TGTTTGCCGT CGGTATCCTT
ATCTGGTTGC TTAATGAATC ATTAGCATCA GCCGACAGTT TCGCAGGTGT CCAATCTCTC
TTTGATAGCT TTATCGTTAA GTTTATCGTC TGGGGAATTC TTACCGCGCT GGGTTATCAC
TTGATAGTGG GTATTCGCCA CTTAGTGATG GATGCTGGCT ACTGGGAAGA ACTCTCTTCT
GGTATAACTT CGGCTAAAGT CGCTATTGCA TTGTCAGTAG TGTTTTCAAT CATTGCGGGG
ATTTGGGTAT GGTAA
|
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| Protein sequence | MKKQRPVHLD LQTIRFPATA IASILHRVSG VIMLFAVGIL IWLLNESLAS ADSFAGVQSL
FDSFIVKFIV WGILTALGYH LIVGIRHLVM DAGYWEELSS GITSAKVAIA LSVVFSIIAG
IWVW
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