Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1767 |
Symbol | |
ID | 5662162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2148259 |
End bp | 2149101 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641236357 |
Product | peptidase M23B |
Protein accession | YP_001501625 |
Protein GI | 157961591 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.287118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAGACCAT TTACTCGTAT CATCTTTAGT AGTGTGTTGA CCAGTATGGC CTTTCAGGTT AGCGCGGGTG TTGAGCTAAA CGGCGAGTTA TCCCAAGGGG CGCTCGTACG AGCAAAGGTA CAACCCGGTA CACAGGTATT TTTAAATGAT GAAGCCGTTA AGGTGAATGA GTTCGGTCAG TTTGCCTTTG GCTTTGCCCG TGAAGCCGAG CTTGAGCAGA TGCTTAAATT AGTTTATCCC GATGGTTTGA CCGAGCTTAA GCCATTAAAA CTGAAACAGC GTCAGTATAA AATCCAACAA GTAAATGGGA TCAGTAAAAA GATCATGAAG CCCGATCCTA AGGCACAAGA GCGTGCAGCC AAGGATTCAA AGCAAGTTAA GGCGGCTAGG GCGCAGTTTA CTGAGAACGA TGCCTTTAAC CAAAATTTTA TCTGGCCGTT AACAGGCAGG ATCTCTGGGG TTTATGGTAG TCAGCGTGTC TATAACGGTA AGCCGGGGAC GCCTCACTAC GGAGTCGATG TTGCTGCCAA AACTGGCACT GTGGTTGTGG CTCCTGCTGA TGGGGTGATC TCGCTTTCAG TACCCGATAT GTTTTACTCC GGCGGTACTA TGATCATCGA CCATGGCTAT GGGGTGAGCT CCAGTTTCTT ACACTTGAGT AAGTTGTACG TCAAACAAGG TCAGCTTGTT AAGCAGGGTG ATAAAGTGGC TGAAGTGGGT TCGACAGGCC GCTCCACCGG CCCGCATCTT GACTGGCGAG TAAACTGGTA TCAGGTGCGA CTGGATCCAA CTACAGTCGT TCCTTCGATG AAGAGTGTAC TGGCTAAAGA AAATGCTAAG TAA
|
Protein sequence | MRPFTRIIFS SVLTSMAFQV SAGVELNGEL SQGALVRAKV QPGTQVFLND EAVKVNEFGQ FAFGFAREAE LEQMLKLVYP DGLTELKPLK LKQRQYKIQQ VNGISKKIMK PDPKAQERAA KDSKQVKAAR AQFTENDAFN QNFIWPLTGR ISGVYGSQRV YNGKPGTPHY GVDVAAKTGT VVVAPADGVI SLSVPDMFYS GGTMIIDHGY GVSSSFLHLS KLYVKQGQLV KQGDKVAEVG STGRSTGPHL DWRVNWYQVR LDPTTVVPSM KSVLAKENAK
|
| |