Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1757 |
Symbol | |
ID | 5662152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 2136378 |
End bp | 2137022 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641236346 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_001501615 |
Protein GI | 157961581 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.290271 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTTC AATTACTTAT ATCACTGTCC ATGATACACC TTATTGCTCT AGCCAGCCCT GGGCCAGATT TTGCTTTAGT GGTTCGCCTC GCGACTCAAG AGTCTCGCGT GGCAGCCGTT GCCTCAGCAT TTGGCATAGC AGTAGCGATT CTTGGGCACA CCCTGCTTAG TTTAACTGGG GTTAGTCTTA TCATTCAAAG CTCAGATGTT TTATTCACCA TCGTTCAGTT AGCTGGTGCC AGTTATTTAG CCTTGATGGG CGTTGGCGCA ATAAAATCGG CATGGCTACA CTGGCAAGAT CCAGTATCGA TTGAGACATG TGTACAAGGG GAAGGAGTAA CCGCTTATAA AGGCTTTATG CAGGGGCTCT ATACCAATAT TTTGAATCCC AAAGCCTTAG TGTTTTTTAT CACCCTATTT TCAACCCTTA TTACACCTCA GGTTAGCTTT TCCACCAAGA GCATGGCGGC TTTCTTGCTG TTTTCCTTAT CCTTTATCTG GTTCAGTTTT ATTGCAATAG TGCTGTCGAA GCCCAGAGTT CAGCTTAAAA TGAAAAAGGT CAGTCCGCTA ATTAATCTCG TCACTGGGTT GGTGTTTATA GGGGTGGCCC TGATGATTAT CTCTGGCCTC GTGACATCGC ACTAA
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Protein sequence | MEFQLLISLS MIHLIALASP GPDFALVVRL ATQESRVAAV ASAFGIAVAI LGHTLLSLTG VSLIIQSSDV LFTIVQLAGA SYLALMGVGA IKSAWLHWQD PVSIETCVQG EGVTAYKGFM QGLYTNILNP KALVFFITLF STLITPQVSF STKSMAAFLL FSLSFIWFSF IAIVLSKPRV QLKMKKVSPL INLVTGLVFI GVALMIISGL VTSH
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