Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1745 |
Symbol | |
ID | 5662140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 2122127 |
End bp | 2123479 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641236334 |
Product | histidine kinase |
Protein accession | YP_001501603 |
Protein GI | 157961569 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000105534 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATTAA AATTTAAGCC TAAGAAGCGT CTGCTAACGC GGATGTTTCT CACCTCTTTA TCCATTATTG CTCTCGTAGG CTTTGGCTTA GCGTGGATGG TTAATATTCT CCACGCCCAA AATAGCTATA ACGAAGAGAC AGCTGAACTT ATCTCTGAGA TCCCAAAAGT AGCAGCCGAG CTTAGGGAAC ACGATCTTAT TCCCGACACC AGTGATGAAT GGCTAGAAGA GAATAATGCC GCCCAGCGTT ATATCATCGC CAGCTGTGAT AACACCTTTA ATCAAGTCTG GACCTCATCC TTAGCGGTAG ACCGTGGTTT ATTCGACACC TGCGAACGCT TTAACGAGAT AAGAAATAGC TCTCCTCCTT ACTACCTGTC ACTGGCGGAC AACAAAGGCT ACTTCATCTA TCTGTTATCG TTAGATATCG CCAGTAATAA GTACAATCTA CTGGTATTGA AAGATGCTGA GAAACTCGAA GAAGAATACA GTAAGTTCAG TCGCCTAACC TATATACGTT TAGCCTTCGT TCTAGCCTTG GCTCTAGTGC TTTTAATCAG TGCCGCCTAT TGGGGAATGA GACCCTTGGT ACGACTTAAA AACGAACTCC AATCGGTCAA CAATGGTAAA GCCAAATCAC TTTCTGATGG CTACCCAGTT GAGCTAGAAG GGGTGACTCA GGCACTCAAC CAACTACTGA ATCAATCCAG TGCTCAGCAG CAACGCTATC AAAACGCAAT GAATGATTTG GCTCACAGCC TTAAAACACG CCTAGCGGCG GTACATGCGA TTACCGATGA CAGAACGCTT GATAAAGATG CCTGCAGCGA GAAAATCATG GAGCAAGTAA GCCAGATGGA TCAATTGGTG AAATACCAAT TGAAGCGCGC CATGTTAGGC CGTAAAGGTC TAAAGCAGGA GCAAACCCAA ATTGCACCTT TGGTCGATCA ACTGGCGCAG ATGTTATTCA AAGTTTATCG TGACAAACAA GTTCAATTTG AAGCCGTGAT CCCTAAAGAG CATGTGTTCC CGGGTGATAA AGGCGACTTG ATGGAACTTT GCGGCAACTT GATGGAAAAT GCCTTTAAGC TGTGTATTTC AACAGTCAGA GTGTCGTCAT ACTATAACGA TGCCGGAGAG TTTGAACTTC TAGTTGAAGA TGATGGTCCG GGTGTAGAAG AAAGCATTCG CCAAAACATC ATTGAGCGAG GTGTACGCGC CGACACTCAA AAAGCCGGTC AGGGCATTGG CCTCGCGGTC TGTAATGAGA TTGTCATCAG TTATGGCGGA CGACTCAGTA TCGAAACTTC CGAGCTTGAA GGCGCCTGCT TTAGGATCTC CATTCCGATT TAA
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Protein sequence | MQLKFKPKKR LLTRMFLTSL SIIALVGFGL AWMVNILHAQ NSYNEETAEL ISEIPKVAAE LREHDLIPDT SDEWLEENNA AQRYIIASCD NTFNQVWTSS LAVDRGLFDT CERFNEIRNS SPPYYLSLAD NKGYFIYLLS LDIASNKYNL LVLKDAEKLE EEYSKFSRLT YIRLAFVLAL ALVLLISAAY WGMRPLVRLK NELQSVNNGK AKSLSDGYPV ELEGVTQALN QLLNQSSAQQ QRYQNAMNDL AHSLKTRLAA VHAITDDRTL DKDACSEKIM EQVSQMDQLV KYQLKRAMLG RKGLKQEQTQ IAPLVDQLAQ MLFKVYRDKQ VQFEAVIPKE HVFPGDKGDL MELCGNLMEN AFKLCISTVR VSSYYNDAGE FELLVEDDGP GVEESIRQNI IERGVRADTQ KAGQGIGLAV CNEIVISYGG RLSIETSELE GACFRISIPI
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