Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1741 |
Symbol | |
ID | 5662136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2117271 |
End bp | 2118509 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641236330 |
Product | hypothetical protein |
Protein accession | YP_001501599 |
Protein GI | 157961565 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.360365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAGTT TTTCCCGCTT GTTATATGCG AGTTTTGTAA CGGTTTTGAG CTTGCTGCCA TTATCTTCCC AAGCAGAAAC AGCGCATTTC TCGGCGCAAT GGTTAGTGGA TGATGTCGTG CTTGCAGAGC GTGTACAAAA CACCGTTTGG CTGGCCATCA TCAGTGACGA GGCCATCGCC GCGAATGTAT CTATACAGGA GGTCAAAGTT AAGCAGCTAT TTATCGAATC TGCCGATGCA CCTATCTATA CCACTCGGAT GATAGAGGGG AAGCGAAAGC ACGTCGCCCA ATTTAAATAT GATATCTACC CAGCTCAGTT TGGTGAGTTT GTCTTGCCTA AAACTGAGAT AACGCTCGGT CGAGGTGACA AAGCTCAAGT GGTAACCTCT TCAAGTAAGC GTGTTGACAT TGCGCAGCAA GTCGATGCTT CAAGGGGGAT GCTCATAACA CCCAAGCTAA CCCTTGAGCA GAAGCTATCA GCCAGTGAGT TTGTTGCAGG TGGAGCCGTG AGCCGAGAGA TCACCATGGC GGTGGATAAC CTGCCTGGCT ATTTAATTGC GGAGCTCTCT CTATCACTCG ATAGTCGGGA TGCTGATCTG CGAGTCACGG CAAATGCGAC CCAATCCCGT GCCTATCGCG GTACGCTTAC AGGTAAGAGA GTAACAGAGC TACAATATCG CTTTTCACGT GTCGGTGAGT ATCGATTACC TGAGATTAAG GTTAGCTGGT GGCATCCAGC GCAAGCAGTG GTGAAGCATA GCATTATTCC TGCAATCGAT ATCGTCGTCA CTCCTCCACC TCCTTTACCC TTAAAGCAGC GAGTCGCTAT ATGGCAGGCG CAGCTCAGTG ATTTTCTCGT GCAGTACCAG TTAGCACTAA TGTTAGTTTT TATCTGTCTG CTTATTGTTT GGTGGCAGCG TCAGCTTATT TTCCAAAAGC TAGGCTACTG TTATGTAGCT GCATTAACAA AGTTAAGCAC TCCTTTGCTT ATGGCATGTC TTATTACATT AAGGGCAGTA TTTACCCCTA AAAAACTGAT GCCTAGCCTG CTCAGTCGCT GGCTACAATG TATTGAGCAA CCTTTTCAGA GCGCGGCAAA ATCTATATTC CTTAGCCTCG AGTACCAAGC CGACGGTAGG GTTAAGCTTG ATAGAGTGGC ACTAATAAAA ACCATGTGCA GCATTGTTTG GCGTCAATAT TGTCAGCCAT TTTCCTTACA GCCGTTAAAT CCAAACTAA
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Protein sequence | MASFSRLLYA SFVTVLSLLP LSSQAETAHF SAQWLVDDVV LAERVQNTVW LAIISDEAIA ANVSIQEVKV KQLFIESADA PIYTTRMIEG KRKHVAQFKY DIYPAQFGEF VLPKTEITLG RGDKAQVVTS SSKRVDIAQQ VDASRGMLIT PKLTLEQKLS ASEFVAGGAV SREITMAVDN LPGYLIAELS LSLDSRDADL RVTANATQSR AYRGTLTGKR VTELQYRFSR VGEYRLPEIK VSWWHPAQAV VKHSIIPAID IVVTPPPPLP LKQRVAIWQA QLSDFLVQYQ LALMLVFICL LIVWWQRQLI FQKLGYCYVA ALTKLSTPLL MACLITLRAV FTPKKLMPSL LSRWLQCIEQ PFQSAAKSIF LSLEYQADGR VKLDRVALIK TMCSIVWRQY CQPFSLQPLN PN
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