Gene Spea_1737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1737 
Symbol 
ID5662132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2113197 
End bp2114117 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content48% 
IMG OID641236326 
Producthypothetical protein 
Protein accessionYP_001501595 
Protein GI157961561 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGTG ATGAGCGTAT ATATACCAAT TTCTCTCGAT TAAGCTTACT GGCTAAAAAG 
GGTAGAGGCC TCAGTTGGCG CCCCCCCTAT AGCAAAATCT CGCCACTTAG CGGTCTGCAG
AAGAGTAGTC AGCGTGGTCG TGGCCTAGAT TTCGTTGAGC TGCGTCACTA CTTTGATGGC
GATGATGTTC GCTGTATCGA CTGGCGCGTG ACTCAGCGTA CTGGACAGGC CTTTATCCGT
CTCTATAGCG AGGAGAAAGA CAAGAGTGCC GTGCTGTTGA TTGACCTTCG TAGCAGTATG
TTTTTTGCAA GTGACGGAGT GATGAAGTCA GTTTTAGCCT CTGAACTCGC GGCGATTATT
GCGGGTCGTA TTCAGGTCGA GGGTGACAGG ATCGGTGCGC TTATGCTCAC AGATACCCAT
ATCGAATCCC ATAGCGCCAT GCGCGGCGAA AAATCTCTTT TGAGCTTATT GGAAAAAGTG
ACCCAGTTAG GTGGCCGTTT ACCCGCTCAA GGGCAAATAG AACCCCCGAG CTTAGATGAT
GCACTCCACC TGCTTTGTCA GCAAAAAATT AAAGAGAGCC AAATCTTTAT TATCAGTGAT
TTCGTTGATT TCATTGATAA AACCAGTCGC GCACTACTAT CTCAACTCGC GAGACACAAT
AATATTATCG GCTTGAGAGT GAGTGACCCT CTGGAGGATG AGCTACCCAA TAGTAACGTT
TTGATGGGCG ATGGTCTGCT ACAGCTGGAG ATCAATGGTG ATAACGGTCA GCTTCGTCAG
CGATATAATC GATTTACCAT CGAGCATAAT CAAGGGGTAG AGAACGGCTT CTTATCAATC
GGCCAGCCTT ACTTAGCATT AACGACTCAC AAAGAGAGTT GGCAGCAGCT GTTTTCTATG
TCGTCTGCTA GGAGGCGCTA A
 
Protein sequence
MSSDERIYTN FSRLSLLAKK GRGLSWRPPY SKISPLSGLQ KSSQRGRGLD FVELRHYFDG 
DDVRCIDWRV TQRTGQAFIR LYSEEKDKSA VLLIDLRSSM FFASDGVMKS VLASELAAII
AGRIQVEGDR IGALMLTDTH IESHSAMRGE KSLLSLLEKV TQLGGRLPAQ GQIEPPSLDD
ALHLLCQQKI KESQIFIISD FVDFIDKTSR ALLSQLARHN NIIGLRVSDP LEDELPNSNV
LMGDGLLQLE INGDNGQLRQ RYNRFTIEHN QGVENGFLSI GQPYLALTTH KESWQQLFSM
SSARRR