| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1731 |
|---|
| Symbol | |
|---|
| ID | 5662126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 2106115 |
|---|
| End bp | 2106915 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641236320 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001501589 |
|---|
| Protein GI | 157961555 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.306149 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACATA TTCCCACTCT GGCTAAAGGG TTAGCCCTAG CCTCGATAGC AACGATAGCA
ACGATCTCAC AGGCTATCGC CGCAGATGAT ACAGAAACAC AAGATATGTC AGATCCTCTT
GCGGTTTACA CACAGCTTGG CGTTTCATAC GGTACTAATG GCATCAATTT AAAGCTGGGT
AAGACCTTAG ACACCGGCTC TGCTACAGAT ATGTCAATGT TCCTTTTTGA GGTCAAGGGG
ATCTATGGCG AACACATGAA GCATCAAGGC TCTAGTTCCC TAACACCAGA AAGTGCCAAC
AATGGAATAT CTGAGCTTCG CTTTCGAAAG TTTGATGTCG ATATGACTAA TGGTCGCGGC
ATATCGATGG ATGTTATTCA TAACTTCGAT ACGAACTCCG GCACTGCATC TTTAGGAATG
ATACAGGCGC TCCCCAAGGT GGGAATTTGG CAAGCATTTC CCATTATTGC GGCAGGTGTT
GAATACAATG ATGGTTCAAA GCATTCAGCC ACCAATGAAG CATCTGGACT CCATTCCGAC
TTTGTCTTCG CAAGCTTCAC TCTTTATAAC AAGTTCCAGT TAACAGACAC CATCTGGGCA
AACTACAACC CCATCTATAC TCAAGCCGTT TTTGGTGATG TTCACTACAC AGAAAACCTA
AAAGGCAGCA ATGGATTAAC TCATGAGTTT ATTCTGAGCT GGCAGATGAC TCCAACTCAA
AACTTCCGCC TCTGGTATAA CGCCAGCCAA AACCAATTTG CTGATGGCGA CTTCCGTCTA
GAGTACAACC AGCAGTTTTA G
|
|---|
| Protein sequence | MKHIPTLAKG LALASIATIA TISQAIAADD TETQDMSDPL AVYTQLGVSY GTNGINLKLG
KTLDTGSATD MSMFLFEVKG IYGEHMKHQG SSSLTPESAN NGISELRFRK FDVDMTNGRG
ISMDVIHNFD TNSGTASLGM IQALPKVGIW QAFPIIAAGV EYNDGSKHSA TNEASGLHSD
FVFASFTLYN KFQLTDTIWA NYNPIYTQAV FGDVHYTENL KGSNGLTHEF ILSWQMTPTQ
NFRLWYNASQ NQFADGDFRL EYNQQF
|
|---|
| |