| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1728 |
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| Symbol | |
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| ID | 5662123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2100616 |
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| End bp | 2101758 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641236317 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_001501586 |
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| Protein GI | 157961552 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTAA ACAAACTAAC TCTGGCGTTA ACTTTAGGCG GCAGCCTTAT TGCAACCTCA
GTTAGCGCTG CTGGCTTAGG TCTTTCACAA ATAGGTACGG CAGAAAGTGT TGCCACAGCA
GGTGCTGCCA ACGTGACCAA CAACCGTGAT GCATCGGCAG TGGTAACCAA CCCTGCTGCG
CTGTCGGGGA TCACCGATAG CAGCACGGTA ATTGGCGTGC AATATTTAGA TGTAAAGTCT
GAGTTTGAAC GTGAGGCGAT GGGTGAAGGG ACAACGGGCA CCGCGGGGCA GTTTATGCCT
CATCTATCCT ACGCCAAAAG ACTCAATGAT GACTGGGTTG CAGGTATTGC GATGCACTCT
CCTGGTGGAT TGGGGATGAG CTATGATAAT GGCGTCGCGG GTGGTCCAGC TAATATCATC
AATGAGAACA ATATCGCCAT TGTAAATATC ACCGCATCGG CGTCATATCA GCTCAATGAC
AAGCTCTCTT TAGGTGCCTC TGTGATTGCT CAATATGCCG ATCTTCAGAT TGATTTATTT
CAGGGAACCG AGCAGGCAAA CACCATAGCG GGCAATAACT GGACTCCCTC ATTTGCGCTA
GGCGCCATGT ACCAGTTATC CGATAGCACT AACTTAGGTT TGACCTATAA CTATGGCGGT
AAGCATGAAC TTGCTCTCGC CACACACCTG CCCGAACCTC AGAGTATGGA TGTTAATTGG
CCTCAGAGTG TTGATCTTGG GATCGAGCAC CAATTGACAA GCGATCTAAC CCTGATGATG
AGTGCTAACT GGCAGCAGTG GAGCCGTTAT AACGACAAAT ACACTGATAC GTGGGGCGCA
GGAATGGCTC TGAGTTACCA GCTAAATGAG TGGACGCTAC AATCAGGTTT AAGCTTTGAC
TCCAGCCCGC TAGACTCAGC AGATAGAGAT GTGGTTCTTC CACTGGATAA GCAGTGGCGA
TTCGGTTTAG GAGCGTTAAA GACGCTAGAT AGTGGCTCGG TACTCGGTAT CGCCTACCAG
TATCAATCAC TCGGTGATGG CCATATTGAT GGAACTACTA ATGGCAGCTT AAACCCAATT
CAACCACAAG GTTTCTACAG CGAAAACCGC ATTCACTTCA TCACAGTTTC ATTAAGTTTT
TAA
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| Protein sequence | MNLNKLTLAL TLGGSLIATS VSAAGLGLSQ IGTAESVATA GAANVTNNRD ASAVVTNPAA
LSGITDSSTV IGVQYLDVKS EFEREAMGEG TTGTAGQFMP HLSYAKRLND DWVAGIAMHS
PGGLGMSYDN GVAGGPANII NENNIAIVNI TASASYQLND KLSLGASVIA QYADLQIDLF
QGTEQANTIA GNNWTPSFAL GAMYQLSDST NLGLTYNYGG KHELALATHL PEPQSMDVNW
PQSVDLGIEH QLTSDLTLMM SANWQQWSRY NDKYTDTWGA GMALSYQLNE WTLQSGLSFD
SSPLDSADRD VVLPLDKQWR FGLGALKTLD SGSVLGIAYQ YQSLGDGHID GTTNGSLNPI
QPQGFYSENR IHFITVSLSF
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