| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1717 |
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| Symbol | |
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| ID | 5662112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2088632 |
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| End bp | 2089894 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641236306 |
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| Product | nucleoside transporter |
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| Protein accession | YP_001501575 |
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| Protein GI | 157961541 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1972] Nucleoside permease |
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| TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTTCA TGGGATTTAT CGGCATGCTA GTGCTTTTAG GCATAGGCTT CGCGTGCTCA
GTTAGTCGAC GTTCAATTAA ACTACGTACA GTTGGTGCGG CACTAGGCTT ACAAGTGTTA
ATTGGTGCGT TTGTACTCTA TGTACCAGTT GGTCGCCAAG CACTTGAATC TATGTCTCAC
GGCGTGCATG TGGTGCTTGA TAGCGGTAAA GCGGGTATTC GCTTCCTATT TGGCAATCTA
GTTAACTTCT CGGTTGAAGG GATAGGCTTT GTATTTGCAC TTAACGTGCT GCCATTAGTA
GTGTTCTTCT CAGCCCTAAT TGCTGTGCTT TACTATCTTG GCATTATGCA GTTTATCATC
CGTATCATTG GTGGTGGCAT GGCTAAACTT CTAGGCACCT CACAGCCTGA GTCTATGTCT
GCAGTGTCTA ATATTTTCGT CGGTCAAAGT GAAGCACCAC TCGTAATTAA GCCTTATATG
GCGAAGATGA GCGACTCTGA GTTCTTCGCT GTTATGTGCG GTGGTATGGC ATCCGTTTCA
GGCACTGTAC TTGCTGGCTA CGCCATGATG GGCGTTGATA TGGAATACCT ACTTGCTGCA
TCATTTATGG CAGCTCCTGG TGGTGTTCTG TTTGCTAAGT TAATCCTTCC TGAAACTAGC
ACTCCGACCT ACACAATGGA TAGCAAGATT CAATTTGATG AGAAGCCTCC GGTAAACGTA
TTAGCGGCAG CAGGCGAAGG CGCAGCGAGT GGTCTTAAAC TTGCGGCGGC TATCGGTGCG
ATGTTAATCG CTATGATTGG TCTGGTTACT CTGGTGAATA ACCTACTAGG CGGTTTTGGT
GACATGGTCG GCCTACAACT GTCTCTTGAA GGGATCTTAG GCTGGATCTT TGCACCGTTA
GCCTTTTTAC TAGGTGTTCC AGCTGCCGAT ATGGCCATTG CTGGATCTAT GATTGGAAAG
AAGCTTATCG TCAACGAGTT TGTTGCCTAC AGTGATCTTG CTCCATACCT AAAAGACTCA
ACAGAAGTGA CTGCAGCAGG ACTGCAAGTA CTTCAAGAAA AGAGTAAAGT TATTATTAGC
TTTGCACTGT GTGGCTTTGC AAACTTAGCT TCTATGGGGA TCTTAATTGG CGGACTAGGT
ACATTGTGTC CATCAAGAAC AGACTTCATC GCCAAGTACG GCTTACGCAC CGTAGTTGCT
GCGACTTGCT CTAACTTAAT GAGTGCTGCG ATTGCAGGTA TATTCTTCTC TTTAGCCAAT
TAA
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| Protein sequence | MMFMGFIGML VLLGIGFACS VSRRSIKLRT VGAALGLQVL IGAFVLYVPV GRQALESMSH
GVHVVLDSGK AGIRFLFGNL VNFSVEGIGF VFALNVLPLV VFFSALIAVL YYLGIMQFII
RIIGGGMAKL LGTSQPESMS AVSNIFVGQS EAPLVIKPYM AKMSDSEFFA VMCGGMASVS
GTVLAGYAMM GVDMEYLLAA SFMAAPGGVL FAKLILPETS TPTYTMDSKI QFDEKPPVNV
LAAAGEGAAS GLKLAAAIGA MLIAMIGLVT LVNNLLGGFG DMVGLQLSLE GILGWIFAPL
AFLLGVPAAD MAIAGSMIGK KLIVNEFVAY SDLAPYLKDS TEVTAAGLQV LQEKSKVIIS
FALCGFANLA SMGILIGGLG TLCPSRTDFI AKYGLRTVVA ATCSNLMSAA IAGIFFSLAN
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