| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1578 |
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| Symbol | |
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| ID | 5661975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1915527 |
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| End bp | 1916744 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641236166 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit F |
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| Protein accession | YP_001501438 |
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| Protein GI | 157961404 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF |
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| TIGRFAM ID | [TIGR01941] NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATGG CAATTGGTAT CGGTATGTTC ACCTTCGTGG TCAGCATATT GGTTATGGTG
ATTTTATTCG CCAAGAGCAA ACTGGTTTCT ACGGGTGACG TTAATATTCG TATTAACGAC
GATCCAGATA AGAGTATTTC GACCCAAGCG GGTGATAAAT TATTAGGCGC GTTAGCGGGC
AAGAATATCT TTATCCCATC GGCCTGTGGT GGCGGTGGTA CATGTGGTCA ATGCCGCGTA
AAAGTTAAAT CTGGCGGCGG TGAAATTTTA GCCACAGAAC GTGACCATAT TAATAAGAAA
GAAGCCAAAG AAGGTTGTCG CTTAGCGTGT CAGGTATCGG TTAAAACCGA TATGGAACTG
GAAGTTGAAG AAGAGATCTT CGGCGTAAAG AAATGGCAGT GTGAGGTTAT TTCAAATAAT
AACCAAGCGA CTTTTATTAA AGAGTTACTG CTTAAATTGC CTGAAGGCGA AGACGTGCTG
TTTAAAGCGG GCGGCTATAT TCAAATTGAA GCACCGGCTC ACGAAGTGAA GTATGCGGAT
TTTGATATCC CAGCCGAGTA TCGTGATGAC TGGGAAAAAT ACGACCTATT CAAGCTAGTG
TCAAAAGTTG ACGAAGATGT GCTGCGCGCA TACTCAATGG CGAACTACCC AGATGAGAAA
GGCCGCATCA TGCTTAACGT GCGTATTGCT ACGCCGCCAA GCGACAATAT CGCTCCAGGT
AAGATGTCAT CGTACATTTT CAATCTAAAA GCGGGTGATA AAGTCACTAT CTCTGGTCCA
TTTGGTGAGT TCTTCGTTAA AGAAACTGAC GCTGAAATGG TATTTATTGG TGGTGGTGCG
GGTATGGCGC CAATGCGCTC ACATATCTTC AATCAGCTTA AAGGTGTTAA AACCAAGCGT
AAGATGAGCT TCTGGTATGG CGCGCGCTCA ACCCGTGAAG TCTTCTATCA AGATGATTTC
GATACCTTAG CGGCAGAGAA CGATAATTTT GTTTGGCATG TGGCATTGTC AGATCCATTA
CCAGAAGATA ACTGGACGGG TTACACGGGC TTTATCCATA ACGTGCTTTA TGAGAATTAT
CTTAAAAATC ACAAAGCACC GGAAGATTGT GAGTTCTATA TGTGTGGCCC TCCAATCATG
AACTCGTCAG TTATTGCGAT GCTCGAAAGC CTTGGAGTAG AGCCAGAGAA CATATTACTA
GATGACTTTG GTGACTAG
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| Protein sequence | MEMAIGIGMF TFVVSILVMV ILFAKSKLVS TGDVNIRIND DPDKSISTQA GDKLLGALAG
KNIFIPSACG GGGTCGQCRV KVKSGGGEIL ATERDHINKK EAKEGCRLAC QVSVKTDMEL
EVEEEIFGVK KWQCEVISNN NQATFIKELL LKLPEGEDVL FKAGGYIQIE APAHEVKYAD
FDIPAEYRDD WEKYDLFKLV SKVDEDVLRA YSMANYPDEK GRIMLNVRIA TPPSDNIAPG
KMSSYIFNLK AGDKVTISGP FGEFFVKETD AEMVFIGGGA GMAPMRSHIF NQLKGVKTKR
KMSFWYGARS TREVFYQDDF DTLAAENDNF VWHVALSDPL PEDNWTGYTG FIHNVLYENY
LKNHKAPEDC EFYMCGPPIM NSSVIAMLES LGVEPENILL DDFGD
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