| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1501 |
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| Symbol | |
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| ID | 5661898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1822390 |
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| End bp | 1823349 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641236089 |
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| Product | dihydrouridine synthase DuS |
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| Protein accession | YP_001501361 |
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| Protein GI | 157961327 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.944581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGGACT GTTCAGTGCG AATAATTTTG GCGCCTATGG AAGGCGTTGT AGATGATTTA
ATGCGAGAGA TCCTCTCTGC CATCAACCCT TATGATCTCA TGGTCACCGA GTTTGTTCGT
GTGGTGGATC AACTGCTGCC TGAAAAAGTG TTCCATCGCC TTTGCCCTGA GCTGCAGACC
GGTGGTCAAA CATTGTCGGG CACGCCTGTT CGAGTGCAGC TACTGGGCCA AAATCCTGAC
TGGATGGCAG AAAACGCTGT AAGGGCAATT GAACTGGGCT CAAATGGTGT GGATGTGAAT
TTTGGCTGCC CCGCAAAGAT GGTTAATCGT AGCAATGGCG GCGCCGTCAT GCTGCAATAC
CCTGAGCAAC TCTATAACGT TGTTAAAGCG ATGCGTGATG CAGTGCCAAG CGAGCAGCCT
GTTACGGCAA AGATACGTCT AGGCTTTAAC GATAAGTCGT TATATATGGA GAACGCCCTT
GCCATTTATG AAGCAGGCGC AAGTGAACTT GCAGTCCATG CTCGCAGCAA GGTCGATGGC
TATAAGCCTC CTGCTTATTG GGAATATATC ACCGACATCA ATGCCAAGTT ACCCATCCCC
GTCATTGCCA ATGGCGAGAT CTGGAATCGA GATGATGCCG AGCGCTGTAT GAGCGTAACT
GGGTGTGACA ATATCATGGT CGGGCGCGGA GCCATTTCAC TGCCAAACCT TGCCGCGCAC
ATTAAAGGCG ATGACACTTA CACTTGGGAA CAATCACTCA ATCTCATGCT TGAATATACT
AATCGCGAAT TAGAGGGAAG AAAGAGTACT TATTACCCGG CTCGGATCAA ACAGTGGTTC
GGTTATCTGA ATCGTCAATA TAGCGAAGCT GATGAACTAT TTAGAGAGCT AAGAGTGTTT
AAAACGGCGG AAGAGATTAT CGACGTGCTA CAACGTGCAC AAGACAATTT AGCCAAATAA
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| Protein sequence | MLDCSVRIIL APMEGVVDDL MREILSAINP YDLMVTEFVR VVDQLLPEKV FHRLCPELQT
GGQTLSGTPV RVQLLGQNPD WMAENAVRAI ELGSNGVDVN FGCPAKMVNR SNGGAVMLQY
PEQLYNVVKA MRDAVPSEQP VTAKIRLGFN DKSLYMENAL AIYEAGASEL AVHARSKVDG
YKPPAYWEYI TDINAKLPIP VIANGEIWNR DDAERCMSVT GCDNIMVGRG AISLPNLAAH
IKGDDTYTWE QSLNLMLEYT NRELEGRKST YYPARIKQWF GYLNRQYSEA DELFRELRVF
KTAEEIIDVL QRAQDNLAK
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