| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1488 |
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| Symbol | |
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| ID | 5661885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1809887 |
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| End bp | 1811101 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641236076 |
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| Product | cysteine desulfurase |
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| Protein accession | YP_001501348 |
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| Protein GI | 157961314 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.645778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTAC CTATCTATCT AGATTATGCT GCGACGACGC CGGTTGACCC TCGTGTCGCA
GAGAAAATGA TGCAATGCCT GACTATGGAC GGCATTTTCG GCAATCCAGC GTCTCGTTCT
CACCGTTACG GTTGGCAAGC TGAAGAAGCT GTCGATATCG CTCGTAACCA AGTTGCAGAG
CTGATTAATG CCGACCCGCG TGAAATCGTG TTTACTTCAG GTGCGACAGA GTCTGACAAC
CTTGCAATTA AAGGTGTTGC TCACTTCTAC CATAAGAAGG GTAAGCACAT CATCACTAGC
AAGACTGAAC ATAAGGCCGT ATTAGATACT TGTCGCCAAC TTGAGCGTGA AGGTTATGAA
GTGACTTATC TTCAGCCTGA GCCAAGTGGT TTGATCCCTG TATCTATGAT TGAAGCCGCT
ATGCGTGAAG ACACAATTTT AGTGAGCATC ATGCAAGTGA ACAACGAGAT TGGTGTTATT
CAAGATATCG ATGCTATCGG CGAGCTTTGT CGTTCACGTA AAATCATATT CCACGTCGAT
GCGGCGCAAA GCGCGGGTAA ATTACCTATC GATGTGCAAA CGACAAAAGT TGATCTAATG
TCTATCTCTG GGCACAAGAT GTATGGCCCT AAAGGTATCG GTGCGCTTTA TGTCAGCCGT
AAGCCGCGTA TTCGCCTAGA AGCAGCAATG CATGGTGGCG GACATGAACG CGGTATGCGT
AGTGGTACTC TTGCGACTCA CCAAATTGTG GGTATGGGCG AAGCTGCTGC TATTGCTAAA
GCTGATATGG AAGTTGATAA CGAACGTATT CGTCGTTTAC GCGATAAGTT ATGGAACGGC
ATCAATCACA TCGAAGAAAC CTATATTAAT GGTGACGTGG AAAAAAGAGC CTGCGGTAGC
TTAAACGTGA GCTTTAACTT CGTTGAAGGT GAATCATTGA TGATGGCACT GAAAGACCTA
GCGGTTTCAT CGGGCTCAGC ATGTACTTCA GCAAGTCTTG AACCAAGTTA TGTTCTACGT
GCACTTGGTC TAAATGACGA AATGGCTCAT AGCTCAATTC GATTCTCAAT CGGTCGCTTT
ACGACAGATG AAGAGATCGA CCATGCAATA GAAACGATTA AAGAATCTAT TGGTAATTTA
AGGGAGATGT CTCCGCTTTG GGAAATGTTC AAAGACGGTA TCGATCTGGA CTCTGTCCAG
TGGGCACATC ACTAA
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| Protein sequence | MKLPIYLDYA ATTPVDPRVA EKMMQCLTMD GIFGNPASRS HRYGWQAEEA VDIARNQVAE
LINADPREIV FTSGATESDN LAIKGVAHFY HKKGKHIITS KTEHKAVLDT CRQLEREGYE
VTYLQPEPSG LIPVSMIEAA MREDTILVSI MQVNNEIGVI QDIDAIGELC RSRKIIFHVD
AAQSAGKLPI DVQTTKVDLM SISGHKMYGP KGIGALYVSR KPRIRLEAAM HGGGHERGMR
SGTLATHQIV GMGEAAAIAK ADMEVDNERI RRLRDKLWNG INHIEETYIN GDVEKRACGS
LNVSFNFVEG ESLMMALKDL AVSSGSACTS ASLEPSYVLR ALGLNDEMAH SSIRFSIGRF
TTDEEIDHAI ETIKESIGNL REMSPLWEMF KDGIDLDSVQ WAHH
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