| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1480 |
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| Symbol | |
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| ID | 5661877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1802901 |
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| End bp | 1804574 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641236068 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_001501340 |
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| Protein GI | 157961306 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.336148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCTAA TATTATTACT AACACAACAG ATGAGCCTCT ACATGGTGAT TGTCTACCTT
GTTAGTAAAA CACCACTCTT TAAAGTCTTT ACCGAAGCTG CGACCCGTCT GCCCCATAAA
GTTTATATCT ACTTCATCTT CTCTAGCTTT TGTATCATGG CGACCTACTT TGGTGAGCAG
ACCAATGATG CTATTGCCAA TACTCGGGCT ATGGGGGCTG TACTCGGTGG GTTACTCGGA
GGGCCTGTCA CTGGATTTTT AGTTGGATTA ACCGGTGGGC TGCACCGCTA TAGCATGGGC
GGCTTTACCG ATTTGGCCTG CGCTATATCG ACAACCCTTG AAGGCTTATC TGCGGGCATG
GTGAGCTATT ACCTACGCCG AATCGGCCAA CAAGAGCTGA TCTACTCGCC ATTAATGGTC
TGCATGGTTA CCTTTGCCGC CGAAGTCATG CAGATGCTAA TTATTCTAAC TGTCGCTAAA
CCGTTCGGTG ATGCCTGGGT CCTTGTAGAG CAAATTGCTC TACCTATGCT AGTCATTAAC
TCTATCGGCG CGGCGCTATT TATGAGTATC ATTCGCGATC AAAAAGCCAT GTATGACAAG
ATGTCATCGG TATTTTCGAC TCAGTCATTA AGGATTGCAG AGCGCAGCGT GGGCATTTTA
TCGACGGGCT TTAACGAAGA AACCAGCAAA CAAGTCGCGC GGATAGTCAA AGAAGAGACC
CAAGTCGGTG CAGTGGCAAT AACCGACACT GAAAAGCTAC TCGCCTTTAT TGGTATTGGC
GACGACCACC ATATCGCCGG CACACCGATC TCATCCAAAA TCACCCAAGA TGCCATTGAG
CAAGACAGAG TCATGTTCGC CGATGGGGTC AACATGCCCT ACGCCTGCTC AATTTCAGGC
AATTGTCAGC TAGGATCAAG TTTAGTTATC CCCCTGCGAT CCGACGCTGA GGTGATAGGT
ACTATTAAAC TATACGAGCC CAAGAAAAAG CTATTTTTGA ATATTAACCG TACCTTAGGC
GAAGGCCTGG GCCGCCTATT GTCGAATCAG ATCCTCTATG GCCGATTTGC CGCTCAACAA
AACTTACTTA CTCAAGCAGA GCTAAAGCTC CTGCAAGCCC AAGTTAACCC GCATTTTCTG
TTTAATGCCT TAAACACTAT TGCGGCCATT ATTCGCCGAG ATCCCAACAC CGCGCGCCAG
CTTATTCAAA ATTTATCGCA GTTTTTAAGG ATCAATTTAA AGCGCACCAC AGGCCTAGTC
ACACTCGCCG ATGAGTTAGA ACACATAGAT TCATACCTGA CGATTGAGAA AGCCCGCTTT
ATTGATAAGC TAACGGTCCA TATCGATATT CCAGAGTCGC TATTGCACAG CAAGCTTCCG
GCCTTCACCC TGCAACCCAT TATTGAGAAT GCGGTCAAAC ACGGCACCTC GAACATGCTA
AGCTCTGGTG TGATCACAGT TAAAGGTGAG CAACTAGCCG ATGAGACTTT ACTTCTATCA
GTCACTGATA ATGCAGGCCT ATATAAGCCA ACAACGAACA GCGAAGGCTT AGGCATGAAT
ATTGTCGATA AGCGTATTCA AAATATGTTT GGTCAGCAGT TCGGCATAGC TATAGATTGT
GAGCCTAACC GCTACACGAC AATCAGTATC CACCTACCAA TAACGGGAAA TTAA
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| Protein sequence | MSLILLLTQQ MSLYMVIVYL VSKTPLFKVF TEAATRLPHK VYIYFIFSSF CIMATYFGEQ
TNDAIANTRA MGAVLGGLLG GPVTGFLVGL TGGLHRYSMG GFTDLACAIS TTLEGLSAGM
VSYYLRRIGQ QELIYSPLMV CMVTFAAEVM QMLIILTVAK PFGDAWVLVE QIALPMLVIN
SIGAALFMSI IRDQKAMYDK MSSVFSTQSL RIAERSVGIL STGFNEETSK QVARIVKEET
QVGAVAITDT EKLLAFIGIG DDHHIAGTPI SSKITQDAIE QDRVMFADGV NMPYACSISG
NCQLGSSLVI PLRSDAEVIG TIKLYEPKKK LFLNINRTLG EGLGRLLSNQ ILYGRFAAQQ
NLLTQAELKL LQAQVNPHFL FNALNTIAAI IRRDPNTARQ LIQNLSQFLR INLKRTTGLV
TLADELEHID SYLTIEKARF IDKLTVHIDI PESLLHSKLP AFTLQPIIEN AVKHGTSNML
SSGVITVKGE QLADETLLLS VTDNAGLYKP TTNSEGLGMN IVDKRIQNMF GQQFGIAIDC
EPNRYTTISI HLPITGN
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