Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1453 |
Symbol | |
ID | 5661850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 1767553 |
End bp | 1768434 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641236015 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001501313 |
Protein GI | 157961279 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.248466 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATTA AACAGCTAAA ATACTTAGAT GCCTTAATTA CAGCGGGTAG CTTCACTAAA GCCGCCGAGC GGCTCAATAT GGCGCAGCCA GCGTTGAGTC AAAGCATTAA GCGCTTAGAG CAGGAGCTCG GCGTCACCCT AGTTGATAGA GGGGCGAATA AAAGCAGTAA AACACTTTCG CTAACTGCTG AAGGCAGCGC TCTACATCAG CATGCCAAGC TGATAATCAA AAATATGGCG CAAGCTGAAG CGCACATAAA ATCGATGGCA AACCTGACGA TGGGCGAAGT CAGAGTTGCA GTGCCTGGTA TGCTAGGGTC TTATTATCTA CCTAGGCGAT TAATGGCATT TCGCCACCAA CATTCAGAAC TTAAATTATC CCTGTTTGAA GGCGGTACTC GAGACACCCT CAGAATGCTA CAGAATGAAG ATGTCGATAT CGCCATCATT ACCGCCAACG ATCTGACCGA TGAGTTTGAC AGTCACCTAC TACTGCAGGA GCAGATGGTC GTCGCAGTGG GTAAAGAACA CCCTTTAGCC AAATTAGATA CGGTGACGCT TCAAGCGTTT TTCCAGCATG AACTGGTATT CTTTAAACCG GGTTACTTTC ACCGTGATTG GATGCTTGAA CAGGCGGAGA AATTAGGCCT TAAGGCAAAT ATCGCCTTTG AAACCAACCT GATTAATCTC ATTAAACAAG TTGTTGCACA GGAGTATGGA ATAACCAGTG TGCTTGAAAT GGTGATAGAA AAACACGACA ACATTTGCGC CAAGCCCTTC AACCCACCTA TCTTTTTGGA TTTGCATATT GCTTGGAAGA AACAACGCCC TATCAGTCAA GCCGACAAGG CGTTCGTTGA GTTTCTGATG CAAAACCGTT AG
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Protein sequence | MDIKQLKYLD ALITAGSFTK AAERLNMAQP ALSQSIKRLE QELGVTLVDR GANKSSKTLS LTAEGSALHQ HAKLIIKNMA QAEAHIKSMA NLTMGEVRVA VPGMLGSYYL PRRLMAFRHQ HSELKLSLFE GGTRDTLRML QNEDVDIAII TANDLTDEFD SHLLLQEQMV VAVGKEHPLA KLDTVTLQAF FQHELVFFKP GYFHRDWMLE QAEKLGLKAN IAFETNLINL IKQVVAQEYG ITSVLEMVIE KHDNICAKPF NPPIFLDLHI AWKKQRPISQ ADKAFVEFLM QNR
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