| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1450 |
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| Symbol | |
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| ID | 5661847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1763886 |
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| End bp | 1765427 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641236012 |
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| Product | transcriptional regulator, TyrR |
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| Protein accession | YP_001501310 |
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| Protein GI | 157961276 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG3283] Transcriptional regulator of aromatic amino acids metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.276382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTGG AAGTCAGCTG TTTAGACCGA GTGGGTCTCG CCAAAGATAT CTTATTGATT
ATGGAAGACT ATGGGATTAA TTTGTTTGCT ATTGACGCAA GCAACCAAGG TTTTCTTTAT
CTACAATTTG CTGAAGTGAG TTTCGATACT CTCAGTGAAT TGCTCCCCCT TATACGAAAA
GTAGAAGGCG TACATGATGT GCGGACGGTG TCATTTATGC CGTCTGAGCA GGAACACTAC
GCACTAAAAA CGCTTTTAAA AACCTTACCA GACTCTGTGT TCTCACTCGA TGTGAAAGGA
CGGATCCGCA TCGTTAATGA ATCGGCCTTA CACACAGTCG GTATGGCCGA ACATGAAGTG
ATAGATGAGC CTATAAATCA TTGGGTGCAG GGATTCAGCT TTAGCCGTTG GTTAAGCGAA
TCAACCGTAC TGGCTCAAGC GACACGGGTG AATATCGGAG AGAATGAATA CTTAGCCGAG
ATGTTACCTA TTTATTTACC CGATAGTGGT AGTGAGACGC CCATTTTAGC GGGTGCAGTG
GTATCGCTAA AATCGCCAGC ACGTTTAGGT AAACAATTTA ACGCCCTGCA AAATCAATCT
AGTGGCTTTG AGAATGTGCT TGCAACCAGT GACAAGATGA AAGAGGTCCT CGTTCAGGCT
CGCCGTATGG CACAGCTCGA TGCGCCTTTG TTGATTACGG GTGAAACGGG GACGGGAAAA
GAGCTAATGT CTCGTGCTTG CCATGATGCC AGTATGCGCC GTGAACATCC TTTTATCGCA
ATTAACTGTG CAGCTATGCC AGACAGTGCT GCCGAAGAAG AGCTTTTTGG TTTTGTTAGT
AATGGCAACG TGGCCAAGCG TGGCTTTATT GAGGAAGCTA AGGGCGGAAC GATTTTTCTT
GATGAGATAG CCGAGATGTC AAAGTCTGCT CAGGTCAAGT TGTTACGATT CATACAAGAC
GGTACCTTTA GACGGGTAGG GGGCGATGAG GAGATCCGCA GTGACGTGCG TATTATCTGC
TCGACGCAGA AGAATCTTGC CGAGCTATGC CAAAATGGCG AGTTTAGAGA AGATCTTTAT
TACCGTATCC ATGTATTGAG TTTTCATGTG CCTTCCTTGC GTGAACGTAA AGTGGATATC
ATTCCGCTGA CAGAAATGTT TTTAGAGCAT TACAGCCAGC AACTATCAAT CCCTATTCGC
CGCATATCAG GTGAGTGTCG CGAGCACCTG TTAGCTTATG CATGGCCAGG CAATGTACGT
CAGCTTAAAA ATGCTATCTT TAGAGCCGTA TCTATGTGGG ATGGAAGTGC AGAACTCACG
GTTGAACAAC TAAAGTTACC CTCATACGCC GAAGGTTTTG GCTATTTCGA TCATCAGTTC
GAAGGCAGTC TTGAGCAAGC GATGAAACAG TTTGAAGCGA GTCTCTTACG AAGATTGTAT
CCGGCTTACC CAAGTACTCG ACAACTAGCT AAGAAGTTAG GTGTATCTCA TACCGCAATC
GCTAACAAAC TACGAGAATA TAAGATCAAC AAACCCAAGT AG
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| Protein sequence | MRLEVSCLDR VGLAKDILLI MEDYGINLFA IDASNQGFLY LQFAEVSFDT LSELLPLIRK
VEGVHDVRTV SFMPSEQEHY ALKTLLKTLP DSVFSLDVKG RIRIVNESAL HTVGMAEHEV
IDEPINHWVQ GFSFSRWLSE STVLAQATRV NIGENEYLAE MLPIYLPDSG SETPILAGAV
VSLKSPARLG KQFNALQNQS SGFENVLATS DKMKEVLVQA RRMAQLDAPL LITGETGTGK
ELMSRACHDA SMRREHPFIA INCAAMPDSA AEEELFGFVS NGNVAKRGFI EEAKGGTIFL
DEIAEMSKSA QVKLLRFIQD GTFRRVGGDE EIRSDVRIIC STQKNLAELC QNGEFREDLY
YRIHVLSFHV PSLRERKVDI IPLTEMFLEH YSQQLSIPIR RISGECREHL LAYAWPGNVR
QLKNAIFRAV SMWDGSAELT VEQLKLPSYA EGFGYFDHQF EGSLEQAMKQ FEASLLRRLY
PAYPSTRQLA KKLGVSHTAI ANKLREYKIN KPK
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