Gene Spea_1436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1436 
Symbol 
ID5661833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1748151 
End bp1748933 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content46% 
IMG OID641235998 
Productputative hydrolase 
Protein accessionYP_001501296 
Protein GI157961262 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1387] Histidinol phosphatase and related hydrolases of the PHP family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTTCAAA CTTTTTGTAA TGAAGAGACC GCCATGAAAT ATCTTGTTGA TACCCATACT 
CATACGATTG CTTCGACCCA TGCTTATAGT ACGTTGCAAG AATATATTGC GATGGCCAAG
CATAAAGGCA TTAAGTTATT TGCCACTACC GACCATGGGC CCGATATGGC CGACGCCCCC
CACTTTTGGC ATTTTGTGAA CTTACGAGTA TTACCACGAA TTGTTGATGG CGTGGGCATT
TTACGAGGCA TCGAAGCCAA TATTAAAAAT GTGGTCGGAG AGATAGACTT CTTTGGTGAT
TACCTGCAAG AGTTAGATAT TGTTCTCGCC GGTTTTCATG AACCCGTTTT TGCGCCAAGC
AATAAAGAAA CTCATACTGC TGCACTTATA AACTGTATCA TGAGTGGTCA TGTCGATATC
ATTACTCATC CAGGCAACCC AGCTTACCCA ATAGACATTG CTGCCGTTGC CAAGGCAGCC
GCCGAGAATA ATGTCGCCCT TGAGATCAAT AACTCCTCTT TTTTAACTTC TCGAAAAGGC
AGTGAACATA ACTGTTTGGC CATTGCCAAG GCGGTTAAAG AGGCGGGCGG GCTATTGGTG
ATGGGCTCTG ATTCTCACGT GGCATACAGC CTAGGAGATT TCACTCAGGC CGAGCAGATT
ATCGAGCAAG CCGATTTTCC CATTGAGCGT TTGCTCAACC GTAGCCCCGA GGCTTTACTG
GCATTTTTGT CAGCAAGAGG CCATGGCTCG CTCGATGAAT ATTCGGCGCT ACTCGAAAAC
TAA
 
Protein sequence
MFQTFCNEET AMKYLVDTHT HTIASTHAYS TLQEYIAMAK HKGIKLFATT DHGPDMADAP 
HFWHFVNLRV LPRIVDGVGI LRGIEANIKN VVGEIDFFGD YLQELDIVLA GFHEPVFAPS
NKETHTAALI NCIMSGHVDI ITHPGNPAYP IDIAAVAKAA AENNVALEIN NSSFLTSRKG
SEHNCLAIAK AVKEAGGLLV MGSDSHVAYS LGDFTQAEQI IEQADFPIER LLNRSPEALL
AFLSARGHGS LDEYSALLEN