| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1412 |
|---|
| Symbol | |
|---|
| ID | 5661810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 1714661 |
|---|
| End bp | 1715428 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641235975 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001501273 |
|---|
| Protein GI | 157961239 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATC CTAATAGTCC TTTAATCAGC ATAGTTATGC CTTTATTTAA CGTCGAAAAA
TATGTTGAGG AATCAATAGA TAGTGTTGTA AATCAATCGT ATTCTAATTG GGAGTTGTTG
TTGGTTGACG ACTGCTCAAC AGATGATACG TGTAAAATTA TTGAGAGTAA ATTCTCTACA
GATAGTCGGA TTAAACTATT TCATAATGAG ATGAATTCTG GTGCTGGTGT TTCACGTAAT
GTCGGCCTAG CTAATTCAAG TGGTATATAT ATTGCTTTTT TAGATTCTGA TGATCTCTGG
TGTGATAATA AGCTAAAACT TCAGGTCAGT TTTATGCTTA ATAATAAGGC TGCTATATCC
CATACTAGTT ACAGTTTCAT TAATGAGTTA GGCATAGATA TTCCTGGGCG AGTTACAGCA
TCAAAAGTGT TGGATTTAGA TTCTTATATG CGAACAACCG AAATTGGCAT GTCAACTTCC
CTAATTTGTA GAACAACTGT CGGTGATTTT ACTTTTGACT CTATGCGTAC AAGGCAAGAT
ACAAAGCTTT GGTTAACATT GTTAGGTCGA GGTTTTGTTT CGAAGGGATT GAATGAACAG
TTAGTAAAAT ATAGAGCTAG AGATGGGCAG ATTAGTAAAA ATAAGCTTGC TGCTGCTCGA
ACGACACTAA AGGTATACCT TTCAGTTAAA GAGATTTCAG TAGCAAGGCG TCTTTTGAAT
TTTTCATATT ATTGTATTAA TGCTACATTG AAAAGGATAA AAAGATAA
|
|---|
| Protein sequence | MSDPNSPLIS IVMPLFNVEK YVEESIDSVV NQSYSNWELL LVDDCSTDDT CKIIESKFST
DSRIKLFHNE MNSGAGVSRN VGLANSSGIY IAFLDSDDLW CDNKLKLQVS FMLNNKAAIS
HTSYSFINEL GIDIPGRVTA SKVLDLDSYM RTTEIGMSTS LICRTTVGDF TFDSMRTRQD
TKLWLTLLGR GFVSKGLNEQ LVKYRARDGQ ISKNKLAAAR TTLKVYLSVK EISVARRLLN
FSYYCINATL KRIKR
|
|---|
| |