Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1380 |
Symbol | |
ID | 5661779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1676918 |
End bp | 1677655 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641235944 |
Product | chemotaxis phosphatase, CheZ |
Protein accession | YP_001501242 |
Protein GI | 157961208 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG3143] Chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.659888 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCAAC AATCGTCAAG CCTGATTACT CTTGAACAAG CAGAGAGTTT AGTTGCACTT CTCAGTCAGG GTGAGCAAGA AAAAGCGGAT GAATTGGTTA GGGAGATTTC CGCACCAATT CAAAAAGATC TCTTTGATGA AGTCGGGCGT TTAACCCGTC AACTTCATAG TGCTATTGCA GATTTTCAAT TTGACAGTCG TCTTATTGAA TTAGCCAACA TAGAGATCCC AGATGCAAAA GAGCGTTTGA CTTATGTTAT TGATATGACA GAGCAAGCGG CAAATAAAAC CATGGATGCA GTGGAAGAGT GCTTACCTCT TGCTAATGCA CTAAACGACA ATATTCAAGC AATAAAACCT GCATGGGATA AGCTGATGCG TCGTGAGTTG CCACTGACAG AATTTAAAGC CTTATGCCAT GATATTCATC AGTTTGTTGA AAGAAGTGAA TCGGATTCAA GCCGAGTCAA AGAGCTTCTA AATCAAATTT TATTGGCACA AGACTTTCAA GATTTAACCG GACAGATGAT CCGTCGAGTG ATTGAACTCG TCAGAGAAGT CGAGAATAGC TTAGTGTCCA TGCTAACAGT ATTTGGTGAG CACCCTCATG ATACTGTTGA TAACAAGCCA AAGCTAAACG TTGAAGCTGA AGGTCCTATT ATGAACGCAG AGCACCGCCA GGACGTGGTG ACGGGTCAAG ATGAAGTTGA CGATCTGCTT TCGAGCTTAG GTTTTTAA
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Protein sequence | MQQQSSSLIT LEQAESLVAL LSQGEQEKAD ELVREISAPI QKDLFDEVGR LTRQLHSAIA DFQFDSRLIE LANIEIPDAK ERLTYVIDMT EQAANKTMDA VEECLPLANA LNDNIQAIKP AWDKLMRREL PLTEFKALCH DIHQFVERSE SDSSRVKELL NQILLAQDFQ DLTGQMIRRV IELVREVENS LVSMLTVFGE HPHDTVDNKP KLNVEAEGPI MNAEHRQDVV TGQDEVDDLL SSLGF
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