| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1319 |
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| Symbol | |
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| ID | 5661718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1611897 |
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| End bp | 1613036 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641235882 |
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| Product | cytochrome d ubiquinol oxidase, subunit II |
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| Protein accession | YP_001501181 |
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| Protein GI | 157961147 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.207544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTGATT ATGAAATGTT AAGATTCATC TGGTGGGCAC TGATTGGTGT GCTTTTCATC
GGATTCGCTG TTACCGACGG CTTCGATATG GGTGTAGGTG CCTTATTACC GATTATCGGT
AAAGACGACA CCGACCGCCG TATTATGATT AACTCGATTG CGCCGCACTG GGATGGCAAC
CAAGTTTGGT TGATCACCGC TGGTGGTGCA TTGTTCGCAG CTTGGCCTAT GGTCTACGGT
GTGTCTTTCT CAGGCTTCTA CGTGGCAATG ATGCTGACTC TGTTTGCATT GTTCCTACGT
CCTGTAGGCT TTGACTACCG TTCAAAGATT GAAGATCCAA GATGGCGTAA GTCTTGGGAC
TGGGCACTGT TTGTGGGTGG TTTTGTTCCG CCGCTAATTA TCGGTGTTGC CTTTGGTAAC
TTGCTACAAG GTGTTCCGTT TAACTTCGAC GAATACTTAC GTGCAACCTA CCACGGTGGT
TTCTTCGGTC TACTTAATGG CTTTGGTATT CTAGCTGGCT TAGTGAGCGT GAGCATGTTT
ATGCTACAAG GTTCAACTTG GTTACAGATG AAGACTGAAG GCGAGCTACG CGTTCGTGCT
GCTAAGATGT CGCAGCTGCT ATCAGTAGCG CTATTCGTAT TCTTTGGCGC TGCTGGTGTA
TGGCTAGTTA ACGGTATTGA CGGTTACGTG ATTACCTCTG CTATCGATAC GTATGGCGTT
TCTGACCCAA CCCTTAAAAC GGTTTCAGTT GAAGCGGGTG CTTGGTTAGT GAACTACGAT
AAGTACCCAC TTACAATGGC GTTCCCTGTG ATTGGCCTAC TTATGCCTAT CTTAGTGTTG
CTATGTAGCC GCTTGAACCG CTCAGGTTTT GCGTTCTTCT TTAGCTCATT AGGCATTGCA
GCGGTAATTC TAACGTGTGG CGCAGCTATG TTCCCATTCG TTATGCCATC ATCTCTAGAG
CCAAACGTGA GTTTGACTAT GTGGGATGCT ACTGCGAGTG AGATGTCATT AACTGTAATG
ACATGGGCTG CAATTATCTT TGTACCGATT GTACTTAGCT ATACTGTTTG GACTTACTTG
AAGATGTTTG GTCGCTTATC TCGCGATTTC ATCCAAAAGA ACAAGACCTC ACTTTACTAA
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| Protein sequence | MFDYEMLRFI WWALIGVLFI GFAVTDGFDM GVGALLPIIG KDDTDRRIMI NSIAPHWDGN
QVWLITAGGA LFAAWPMVYG VSFSGFYVAM MLTLFALFLR PVGFDYRSKI EDPRWRKSWD
WALFVGGFVP PLIIGVAFGN LLQGVPFNFD EYLRATYHGG FFGLLNGFGI LAGLVSVSMF
MLQGSTWLQM KTEGELRVRA AKMSQLLSVA LFVFFGAAGV WLVNGIDGYV ITSAIDTYGV
SDPTLKTVSV EAGAWLVNYD KYPLTMAFPV IGLLMPILVL LCSRLNRSGF AFFFSSLGIA
AVILTCGAAM FPFVMPSSLE PNVSLTMWDA TASEMSLTVM TWAAIIFVPI VLSYTVWTYL
KMFGRLSRDF IQKNKTSLY
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