Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1300 |
Symbol | |
ID | 5661699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 1582695 |
End bp | 1584473 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641235863 |
Product | 5'-nucleotidase |
Protein accession | YP_001501162 |
Protein GI | 157961128 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.291258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACCA CCCTACCTAA ATCAGTGGCG ACAAAAGCGC AATACAAGTT AAAACTTGCC CACATCAATG ACACTCACTC ACACTTCGAT GCAAACCGTA TTCAATTTAC GATTTGTGAG CAGCAAAAAG AGCTGACTCT CTATAGCCAC ACAGGTGGTT ATGCTCGTAT CGCTTACCAG CTCAAACAAG CAAGAAACAC AGCCAAAAAA GAACGGCAGG AATTTTTATT CTTGCACGGC GGAGACAGTT TCCAAGGCAC GCTTTACTTC AATGAGTTCA AAGGTAAAGC CAACTCAGAC CTGTTGAACA TGCTCCAGCC TGATGCCATG GTGCTAGGCA ATCATGAAAT AGACGCGGGT AACGAGCCAG TACTCGACTT TCTTAATGAT ATTAAGTTTC CCCTAATGGC TGGCAACATG GATCTTAGCC AAGAGTGCCT AAATAAAAGT GCGCGCCTAG CTAATCACCG AAACTTACTC GACTTTAACC CTGAGTCACA AACTGCCAAA GTACTGCTAA AGCCATTAGC TGATAAGCAA ATCGCCTGCT TTGGCATCAC GCTCGACCAA ATGAGTGAAA TTGCAGGCCC TGATGAAGAC ACCCATTTTA TTAACGCTAT CGCCACTACT CGGCGCACGG TTGCTCAGCT AAAGGCTCAG GGCATTGACC ACATTATCGT ATTGAGTCAC CTAGGGCTGG ATCAAGATAA AGTCTTAGCC AGTGAAGTCG ATGGCATTAG CCTCATTGTT GGTGGTCACT CACATACCCT ACAAGGTGAC TTTAGTGAGC TTGGCTTATC TAATATGCCC TATGGTGAGC GTATTAACGA TACCGCGATA GTACACGCAG GTAAGTATGC CGAAACCTTA GGTATTGCCG ACATCACTTT TGACTCTAAA GGTAAGGTAT TAACGCTCAT GGGTGGCAAT TACTTCATGT TAGATCAGCA GTTTATCCTG CAGGCTTCCG ATGATGTCAG TCCTCAAGAT TATCTAAATG TTCGTCAACA ACTACAATCC CATCCACTGA TCTTATGGGA TGGTGAAGAT AGCTTGGTGC AGACAAGAAT TCAGCAAAAA TACCGACCTA GTCTCGATGC GCTAAATAAT AAAATCTTGG GCTTTGTCCC TAAAAGCTTG GTTCATACAC GCTTGCCCAG CAAAGCTCTG CCCCACGGCA GTGAAATTGC GCCATGGGTC AGCCGTAGCA TGTATCAGGA AACCAGAGAG CTAGGGGTTG AGGTCGACTT CGCACTGCAT AATGCCGGTG GCGTACGTCA GTCTCTCGAT AAAGGTGATG TGAGTTTGGC GGAGATCTTA GGACGCATTT TACCTTTCGA CATCCCATTA GTGACCTATG AGATCCAAGG CCAGTATCTA TTTCAGATGC TAGAGTCTGC GATAAATGCG GCAACCAATA ACAGTGTGAT TGGCACTGGT GCGGGAAGCT TCCCTTACAC CTATGGCTTG AAATACTTTT ATGATGGTAA ACAGGCTTTA GGACAACGCA TCATCAAGCT TGAAGTCCTC AGTGATGTAG AAGGTACAAT GCAGTGGCGA GAAGTCGATG CGAAGGCTCA TTATAAAGGG GTCTCCTCTT CCTATACCGC ATCGGGTAAG GAAGGTTATC ACCCGATATT GAAAGCAAAT TGGCAAAAAG ATGTCGATGG CTTGAGTCTG CCACAAGCTT TCATTCGCTT TATCAGTAAA GCCCAAAGCT TAGATGAAGT GCTCGAACCA CAGGTTCACT ACACCAGCCA TAATCTCGCG CCACTGTAA
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Protein sequence | MTTTLPKSVA TKAQYKLKLA HINDTHSHFD ANRIQFTICE QQKELTLYSH TGGYARIAYQ LKQARNTAKK ERQEFLFLHG GDSFQGTLYF NEFKGKANSD LLNMLQPDAM VLGNHEIDAG NEPVLDFLND IKFPLMAGNM DLSQECLNKS ARLANHRNLL DFNPESQTAK VLLKPLADKQ IACFGITLDQ MSEIAGPDED THFINAIATT RRTVAQLKAQ GIDHIIVLSH LGLDQDKVLA SEVDGISLIV GGHSHTLQGD FSELGLSNMP YGERINDTAI VHAGKYAETL GIADITFDSK GKVLTLMGGN YFMLDQQFIL QASDDVSPQD YLNVRQQLQS HPLILWDGED SLVQTRIQQK YRPSLDALNN KILGFVPKSL VHTRLPSKAL PHGSEIAPWV SRSMYQETRE LGVEVDFALH NAGGVRQSLD KGDVSLAEIL GRILPFDIPL VTYEIQGQYL FQMLESAINA ATNNSVIGTG AGSFPYTYGL KYFYDGKQAL GQRIIKLEVL SDVEGTMQWR EVDAKAHYKG VSSSYTASGK EGYHPILKAN WQKDVDGLSL PQAFIRFISK AQSLDEVLEP QVHYTSHNLA PL
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