Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1290 |
Symbol | |
ID | 5661689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1573642 |
End bp | 1575306 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641235853 |
Product | malate synthase |
Protein accession | YP_001501152 |
Protein GI | 157961118 |
COG category | [C] Energy production and conversion |
COG ID | [COG2225] Malate synthase |
TIGRFAM ID | [TIGR01344] malate synthase A |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAAG TTTTGGGAGA TAAAATGATG ACAGAGCAAT TAACAGCGCT AGATACTTGC GACGCACTGG TATCGAGTCA AGAGTTACAG ATAAAAGGGC AAGCTGTTGC AGGGCAGGAG CAGGTATTAA CTGAAGGCAC ACTGTGCTTG TTAAAGGCAT TGTGTAAGCA GTTTGCGCCA CAGGTGCCAG ATTTACTTGC TAATAGGCAG GCAAAGCAAA AGCGTATTGA TTTAGGTGAG TTGCCCGATT TTTTGGAGGA GACCAAGGAG ATCCGTCAAG GGAATTGGCA GATCCGAGGT ATTCCTGAAG ACTTACAAGA TAGGCGCGTA GAGATCACCG GGCCTGTTGA GCGCAAGATG GTGATCAATG CGCTTAATGC TAATGCCAAA GTGTTTATGG CCGATTTTGA GGATTCACTG GCGCCAAGCT GGCACAAGGT GGTGCAAGGT CAAATCAACC TGCGGGATGC GGTGAACGGT GATATTGGCT ATACGGCGCC AGAAACAGGC AAGCATTATT CATTAAATGA CAATCCTGCG GTGCTTATTT GCCGAGTCCG TGGTCTACAT ATGCAAGAGC AGCATGTGCA GTTTGGCGGC GTCGCCATTC CTGCTGGCTT GTTCGATTTT TGTGTCTATT TCTACAATAA CTACTGTAAG TTATTGAGTA AGGGCAGCGG GCCGTATTTT TATATTCCTA AGCTAGAAAG CCATCTAGAG GCCAAGTGGT GGGCAAGAGT GTTTGCTTTT GTTGAGGCGC GTTTCTGTTT ACAGCCTGGC ACCATAAAAT GTACCTGCCT AATTGAAACC CTACCCGCCG TCTTTGAGAT GGATGAGATC TTGTATGAAC TGCGCTCTAA CATCGTTGCG CTTAATTGCG GTCGTTGGGA CTATATATTT AGCTATATTA AAACCCTAAA TAACCATAGC GACAGAGTGC TGCCCGACAG GCAGTCGGTC ACCATGGATA AGCCATTTTT AAGTGCTTAC TCTCGCTTAT TGATCAAGAC CTGCCACAAG CGTGGTGCGT TAGCTATGGG CGGCATGGCA GCCTTTATTC CAGCAAAAGA TACTGAGCTC AATCAACAAG TGCTAGCTAA GGTTAAACAG GATAAGCAAC TCGAAGCGCG AAATGGCCAT GATGGCACTT GGGTAGCACA TCCTGGGCTG GCCGATACTG CGATGGCAAT TTTTAATGAA TACATAGGTG AAGACCATAT TAATCAACTA CACATTACCC GTGATGTTGA CGCCCCTATT CATGCTAGAG AGTTACTCGA ACCTGCAAAG GGGCAATGTA CAGAAGCTGG CATGCGCCTC AATATTAGAA TTGCACTGCA ATACATAGAG TCGTGGATTA ACGGCAATGG CTGCGTGCCT ATCTATGGCT TAATGGAGGA TGCGGCTACG GCTGAAATAT CTCGCACTTC AATTTGGCAG TGGATTAAGC ATCGTCAGCA GCTTACCTCT GGGGCTGTGG TCACTAAGGC ACTATTTAAG GATATGTTGG TAGAAGAGCT CGCCCACGTT AAAGATGAGG TAGGGGCCGA TCGTTTTACT CACGGCAGTT TTACTCAGGC CGCAGTCTTG CTAGAGCAGA TCACTACAGC AGACGAGTTG GTCGATTTTT TAACTGAGCC GGGATATCAA CTGTTGGTGG AGTAA
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Protein sequence | MSKVLGDKMM TEQLTALDTC DALVSSQELQ IKGQAVAGQE QVLTEGTLCL LKALCKQFAP QVPDLLANRQ AKQKRIDLGE LPDFLEETKE IRQGNWQIRG IPEDLQDRRV EITGPVERKM VINALNANAK VFMADFEDSL APSWHKVVQG QINLRDAVNG DIGYTAPETG KHYSLNDNPA VLICRVRGLH MQEQHVQFGG VAIPAGLFDF CVYFYNNYCK LLSKGSGPYF YIPKLESHLE AKWWARVFAF VEARFCLQPG TIKCTCLIET LPAVFEMDEI LYELRSNIVA LNCGRWDYIF SYIKTLNNHS DRVLPDRQSV TMDKPFLSAY SRLLIKTCHK RGALAMGGMA AFIPAKDTEL NQQVLAKVKQ DKQLEARNGH DGTWVAHPGL ADTAMAIFNE YIGEDHINQL HITRDVDAPI HARELLEPAK GQCTEAGMRL NIRIALQYIE SWINGNGCVP IYGLMEDAAT AEISRTSIWQ WIKHRQQLTS GAVVTKALFK DMLVEELAHV KDEVGADRFT HGSFTQAAVL LEQITTADEL VDFLTEPGYQ LLVE
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