| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1228 |
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| Symbol | |
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| ID | 5661627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1493670 |
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| End bp | 1495079 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641235790 |
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| Product | nitrite reductase (cytochrome; ammonia-forming) |
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| Protein accession | YP_001501090 |
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| Protein GI | 157961056 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3303] Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0609624 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGTCA TAAATCTGAT GAAAGTTGCT GGTGCGTTCT CTCTAGCTTT GCTGATGCCG
ATTACGGCTG TACAGGCAGA AGAAAACGCC AATGCACAGA CAGCGGCAGC AAAAGAGCAG
CAGCTTAGAG ATAAATCGCT GCGTGAAAAG TTTCCAGTGC AGTATCAAAG CTGGCAGGAG
ACCTCTGAGC AGAGCGTGCG TGAAGATATG CTGGCCAGCT ATCCTGCGGC GATTATTTTG
TGGGCGGGTT CGTCATTTGC CAAAGAGTAC AATAGCCCTC GCGGCCATCA CTTCGCGGTG
GCAGATGTGA CTCACACGCT GCGTACTGGG GTGCCGCCAG CGGCAGGAGA TAAGGGCTTG
TCTGGTAGCT GCTGGACCTG TAAAACCCCC GATGCGCCAA GACTGATGAA AGAGTTAGGT
GTTGAAGGTT TTTCTGCCAA AAACTTTACC GATGTTGGCA CTGAAGTTAA TAGTGTGGTC
TATTGCACCG ATTGTCACGT TGACGGCAAG GCCGAGCTGG CTCTGCCACG GCCGCATGCC
CAAGATGCGA TGGCAAAAGT GCACCTGCCT TTCGATAAGC AAGATGCCAA TATGCAAGGA
GCACAGGTTT GTGGTCAGTG TCATGTGACT TACTATTTCC AACCCGAGCG CAGTGACAAG
GTCAATATAC CGTGGATCTT CGGTAACAAT GTTGACGATA TAGAGAAGTA TTACGATACC
CGTCGCTTCT ATGAGTGGAT CCATCCTATT TCGAAAACAC CCATCTTAAA GGCGCGACAC
CCTGAGTTTG AGCACTGGGT GAGAAGTGAG CACGCCGAGG CTGGGGTAAC CTGTATTACC
TGCCATATGC CGGAAGAAAC AGATAAGCAA GGCAATAGCT TTACCAGCCA TAAAGTGAGT
AAAGCACTGG ATCATTTCGA TTCGGTTTGC CAAAACTGTC ACAAGAGCGA AAAAACCATT
ATCAAGTCCC TTGAAAACAG CAAAGCTAAA ATTGATGCTA AAGCGCGAGA AGTGGAAGGA
CTGCTAGTTA AAGCACACTA CGAGGCGCAA GCAGCGTGGG AGGCGGGCGC AACATGGCCG
TTGATGAACG ATGCCATTAT GGCTATTCGT CATTCACAGT GGCGCTGGGA TTTTGCCATG
GCGTCCCATG GCCTGTACGC CCATAACCCC AAAGAAGGCA ATGCGCTTTT AGATATGTCG
ATCAGACAGG TTAATTATGC CCGTGAGTCA TTAGCCGAGA TCTTGAAGAA GTTTGCTGTT
AGCAAAGTGG ACTATCCCGA CATTAGCAGC AAAGAGTCGG CTCAAGCTGC TGTTGGCATT
AAGCTTGATA AATTGACCCA AGAAAAGCAG GAATTTATTA AGCAAGAGGT TGATAAAAAT
TGGTCTGAGG TGACTCGCTA CGGTTACTAA
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| Protein sequence | MTVINLMKVA GAFSLALLMP ITAVQAEENA NAQTAAAKEQ QLRDKSLREK FPVQYQSWQE
TSEQSVREDM LASYPAAIIL WAGSSFAKEY NSPRGHHFAV ADVTHTLRTG VPPAAGDKGL
SGSCWTCKTP DAPRLMKELG VEGFSAKNFT DVGTEVNSVV YCTDCHVDGK AELALPRPHA
QDAMAKVHLP FDKQDANMQG AQVCGQCHVT YYFQPERSDK VNIPWIFGNN VDDIEKYYDT
RRFYEWIHPI SKTPILKARH PEFEHWVRSE HAEAGVTCIT CHMPEETDKQ GNSFTSHKVS
KALDHFDSVC QNCHKSEKTI IKSLENSKAK IDAKAREVEG LLVKAHYEAQ AAWEAGATWP
LMNDAIMAIR HSQWRWDFAM ASHGLYAHNP KEGNALLDMS IRQVNYARES LAEILKKFAV
SKVDYPDISS KESAQAAVGI KLDKLTQEKQ EFIKQEVDKN WSEVTRYGY
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