| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1194 |
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| Symbol | |
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| ID | 5661593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1448117 |
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| End bp | 1450696 |
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| Gene Length | 2580 bp |
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| Protein Length | 859 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641235746 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_001501056 |
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| Protein GI | 157961022 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.272547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCTA TTGATCCCCA AAGCTTAGAA AAACACACTC CTATGATGCG TCAATATTTG
ACCTTAAAAG CCCAGCATCC CGATATGTTG CTCTTTTATC GCATGGGCGA TTTTTATGAG
CTCTTTTATG AAGATGCAAA AAAAGCATCT GAGCTACTTG GGATCTCGTT AACGGCCCGT
GGTAAAAGTG GCGGAGACCC GATCCCCATG GCAGGCCTCC CCTATCACGC TGTCGAAGGC
TATTTAGCTA AGCTCGTTCA GCTACGTGTA TCGGTAGCGA TTTGCGAGCA AGTTGGCGAT
CCTGCGACCT CAAAAGGTCC GGTTGAGCGT AAGGTCGTAC GAATTGTAAC CCCTGGTACA
TTAACAGACG AAGCCTTACT GCAAGAGAGA CAAGACAACC TGCTTGCTGC GCTTTACCAA
GGCAAAACGG GTTACGGTTA TGCAACCTTA GATGTCGCAT CTGGACGCTT TGTTGTCACC
GAGCTTGCCA ATACCGAAGC CTTAGAGGCT GAGTTACAAC GTACTAACCC TGCCGAGTTA
CTCTATAGCG AAGACTTCTC GCAGATGAGT CTTATCGCGG GTATGAATGG CACAAGACGC
AGGCCCGAGT GGGAGTTCGA TTACGATACC TGTCAGCGTA TGCTGCTTAA TCAATTTGGC
ACTAAAGATC TAAAAGGCTT CGGTATCGAA GACGCGAGGC TTTCTTTACA GGCTGCGGGT
TGCTTGATGC AGTATGTCAA AGACACCCAA CGTACAGCAC TGCCGCATAT CAACTCGATC
GTGCGCTTCA ATCAGTCAGA CAGCATAGTG CTCGATGCCG CGACCCGCCG TAATTTAGAG
CTTACGGTAA ACCTGCAGGG CGGCCGCGAA AACACCCTAG CTTCAGTGCT AGACAATACC
GTTACACCTA TGGGAAGCCG AATGCTGCAA CGCTGGATCC ACCAGCCTCT TCGCGATCAT
GACATTATTC GAGCAAGACA AGCATCGATA GCAGAACTGA TGATGACTGG CGACTTTGAG
ACGCTATCAG AAGATCTGAA AGCCCTAGGA GATGTAGAGC GCATTACGGC ACGTATTGCA
CTGCGTAATG CTCGCCCAAG AGACTTTGCA CGCCTACGTC AAGCTCTGAC CTTACTGCCT
CAGCTACAAC AAACACTAAG CGCCGCCAGT GCGCCGCACC TTAAATACCT ATCGCAAGTG
ATTGGTGTGT TCCCTGAGGA GGTTGATCTA CTCTCGCGTG CGGTTGTCGA TAATCCACCC
ATGCTTATTC GCGATGGTGG TGTGATCCGC GAGGGCTACA ATGAAGAGCT AGATCAATGG
CGTAAGTTGA GCGAAGGCGC CACAGATTAC TTGCATGAAC TGGAAGCCCG AGAGAAAGAG
CAAACCGGAA TTTCAACACT AAAAGTCGGC TACAACCGAG TCCATGGCTA CTATATCGAG
GTCAGTCGTC GTGAGTCTGA TCTTGTGCCA CTGAGCTATC AGCGCAGACA AACCCTGAAA
AATACCGAAC GCTATATCAT TCCCGAGCTA AAAGAGCATG AGGAAAAAGT GCTATCTAGC
CAAGGCAGAG CCCTAGCGCT AGAGAAACAG TTATGGGAAC AGCTATTCGA TCTTATATTG
CCTAAGCTGC ATGAACTACA AGACTTCGCC CAAGCATCGG CCGAACTAGA TGTATTATGT
AACTTTGCCG AACGAGCCGA GAGCCTTAAT TACCATTGCC CAGAACTATC GAGCATATCA
GGTATTCACA TTGAGGCGGG TCGTCACCCT GTAGTAGAAC AAGTAAGCCA GAGTCCATTT
ATCGCCAACC CGGTAACTTT AAACGCCCAG CGTAAGATGC TGATCGTCAC AGGTCCGAAT
ATGGGCGGTA AGTCTACCTA TATGCGTCAA GTAGCCTTGA TCACCCTTAT GGCTCATATC
GGTTGTTATG TCCCTGCAGA GCAGGCCGTC ATTGGCCCTG TAGACAGAAT ATTTACCCGT
ATTGGTGCAT CAGATGACTT GGCCTCGGGT CGTTCAACCT TTATGGTTGA GATGACTGAA
ACCGCTAACA TCTTGCATAA CGCTACGCCA AACAGCTTAG TTTTAATGGA TGAGATTGGC
CGAGGAACCT CGACCTATGA CGGCCTATCT CTGGCATGGT CTGCTGCCGA GTATTTGGCT
AAACAGTTAC AGGCAATGAC ACTGTTTGCC ACTCATTACT TTGAGCTAAC ACAACTACCT
GAACAGCTTA GCAATGTGGA AAATGTGCAC CTTGATGCCG TCGAACATGG TGACAGCATA
GTATTTATGC ATGCCGTTCA AGAGGGAGCA GCAAGCCGCA GTTATGGCCT TCAGGTAGCA
GCACTTGCAG GAGTGCCAAA TTGTGTCATC AGCGCAGCGA AACACAAGTT ACATCAACTT
GAGAGCCGCG ATCACGATGT ACAACAAAAT ACCGAACAAC AAGGTACCCA GCAAAACATG
AGCTTTGTGC CTAGTGCTCC ATCCCCAGCT GTAGAAGCAC TACAAAAGCT AAACCCAGAT
GAGTTGACCC CAAGACAAGC ACTGGACTAC TTATATAATC TTAAAAAATT GGCTTTATAG
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| Protein sequence | MTAIDPQSLE KHTPMMRQYL TLKAQHPDML LFYRMGDFYE LFYEDAKKAS ELLGISLTAR
GKSGGDPIPM AGLPYHAVEG YLAKLVQLRV SVAICEQVGD PATSKGPVER KVVRIVTPGT
LTDEALLQER QDNLLAALYQ GKTGYGYATL DVASGRFVVT ELANTEALEA ELQRTNPAEL
LYSEDFSQMS LIAGMNGTRR RPEWEFDYDT CQRMLLNQFG TKDLKGFGIE DARLSLQAAG
CLMQYVKDTQ RTALPHINSI VRFNQSDSIV LDAATRRNLE LTVNLQGGRE NTLASVLDNT
VTPMGSRMLQ RWIHQPLRDH DIIRARQASI AELMMTGDFE TLSEDLKALG DVERITARIA
LRNARPRDFA RLRQALTLLP QLQQTLSAAS APHLKYLSQV IGVFPEEVDL LSRAVVDNPP
MLIRDGGVIR EGYNEELDQW RKLSEGATDY LHELEAREKE QTGISTLKVG YNRVHGYYIE
VSRRESDLVP LSYQRRQTLK NTERYIIPEL KEHEEKVLSS QGRALALEKQ LWEQLFDLIL
PKLHELQDFA QASAELDVLC NFAERAESLN YHCPELSSIS GIHIEAGRHP VVEQVSQSPF
IANPVTLNAQ RKMLIVTGPN MGGKSTYMRQ VALITLMAHI GCYVPAEQAV IGPVDRIFTR
IGASDDLASG RSTFMVEMTE TANILHNATP NSLVLMDEIG RGTSTYDGLS LAWSAAEYLA
KQLQAMTLFA THYFELTQLP EQLSNVENVH LDAVEHGDSI VFMHAVQEGA ASRSYGLQVA
ALAGVPNCVI SAAKHKLHQL ESRDHDVQQN TEQQGTQQNM SFVPSAPSPA VEALQKLNPD
ELTPRQALDY LYNLKKLAL
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