Gene Spea_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1179 
Symbol 
ID5661578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp1429957 
End bp1430562 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content41% 
IMG OID641235731 
Producthypothetical protein 
Protein accessionYP_001501041 
Protein GI157961007 
COG category[S] Function unknown 
COG ID[COG3068] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.290271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAACA AACAGGGATT TTTTAAACGT TTAAAAGCAT TAGAGTTACC CCAGAAAAAG 
CTTTTTGCGG TTGCCCTATG CCAACGCATG CTACCTAACT ATCAGCTTTT TTCTGAAGTG 
TGCGAATTTG GCGATCCAAA AGTACTCGAC ACCTTGCTTA ATCTACTTTG GCAATCGATG 
TACGATAACA AGCTCAAGCT GAACATAGAT ATCTACCTTG AACGCCTTGA AGACAATACC 
CCTGAACCAA GCGACTTTGA TGTTTACGGT GTGTATCCAG CTATGGATGC CGCAGTTGCA 
TTAACCTCAC TTATCAGTGC GCTACAGAGC AAAGTCGAAG AAGATATTAC TAACATTAGT 
AAACTATCTT CATCCACAGT TGCTAACTAC ATCGAAGCAA CCTGTGAGCA GGAGTTCAAA 
AACGAAGACG AGCTCGATGA CTATATCTTC GGCCACGAAG TGATGCAGGA AGAGAAAGAG 
ATGCAAGAAT CTCTTTTACA AATCATCGAG GAAAACCCAT CAATGAAGGC CGACTTCATT 
AAAGGTTTGC GTAAAGAAAT CGTTGAGATC GGTGTATCAA ATATTGGTAT CGAAGCGAGC 
CGATAA
 
Protein sequence
MTNKQGFFKR LKALELPQKK LFAVALCQRM LPNYQLFSEV CEFGDPKVLD TLLNLLWQSM 
YDNKLKLNID IYLERLEDNT PEPSDFDVYG VYPAMDAAVA LTSLISALQS KVEEDITNIS 
KLSSSTVANY IEATCEQEFK NEDELDDYIF GHEVMQEEKE MQESLLQIIE ENPSMKADFI 
KGLRKEIVEI GVSNIGIEAS R