Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1169 |
Symbol | |
ID | 5661568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 1413389 |
End bp | 1415050 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641235721 |
Product | recombination and repair protein |
Protein accession | YP_001501031 |
Protein GI | 157960997 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0497] ATPase involved in DNA repair |
TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTGCC AACTCAGCAT CAACAACTTT GCTATTGTGC GTTTCTTAGA GCTCGACTTT AAAGCCGGCA TGACCAGTAT TACTGGTGAA ACCGGTGCGG GTAAATCGAT TGCTATCGAT GCCCTCGGCC TATGTTTAGG TAACCGAGCC GACGCCAATA CCATTAGACC TGGTGCCACT AAGGCCGAAG TAAGTGCCCG CTTTTTATTA GATGATACCC CAGCGGCAAG ACGCTGGCTT GAAGATAACG ACCTTGAGCT CGGAGATGAA TGTATCCTGC GCCGCACCAT AAGCAGCGAC GGCCGCTCAC GCGCCTATAT CAATGGTAAC CCTGTACCTT TGGCGCAGAT AAAGTCCCTT GGTCAGTTGC TTATTGGTAT TCATGGCCAA CATGCTCACC ACGCTATGCT AAAGAGTGAG CATCAACTGA TCCTGTTAGA TAGCTATGCT AACCATAAAA TGCTGCTCGA CAGTGTCGCT GCCAGTTACC ACAGATGTAA AACCACTGAG AAGCAACTGC ACCAACTTGA GATGTCGCAG CAGGAACGCT TAGCCCGTAA ACAGCTACTG CAATATCAAG TTGAAGAGCT AAACGAGTTT GCTATCAATG AAGGCGAATT TGAGTCGATT GAGGCCGAAC ATAAGAAGCT GGCTAACAGC ACTGCATTAA TCGAACTGTG CCGTAATCAG CTTCATATAT TGCAAGACAA CGATGATGGC AGCGTTGAGT CGTTGCTCAA CACCTCTATC AGTCAGGGTC AAGATCTTGA GAGTTATGAT CCTGAGCTTG CTAGTGTACT TGCCATGCTT AATGACGCCC TCATTCAGGT GCAAGAGAGC AGCAGCGAAA TTGAGCGTTA CTTAGATGGC TTAGAGCTGG ACCCCGAGTA TTTTGCTCAT CTAGAGCAGC GCCTGTCTAA GACCATGCAA CTTGCCCGTA AGCATCAAGT AATGCCAAAT GAGCTTTATA CGCATCACCA AAGTTTATTG GAAGAGCTTG AAGACTTAGG CTCAGACTCT GACAAACTAG ATGATATTCG TGAGCAGCTA AACGCAAATC GCGAAGCTTA CCTGCAACAC GCTAGAAAGC TCAGCCAAAG CCGTAGCCGT TACGCTAAAG AGTTAGATAA ACAGGTGACT CAGTCTATCC ATGAGCTCAA CATGCCTAAG GGCAAGTTTA CCATTGCAGT GAACTTCAAT GAGGCAGTTA TCACCCCAAC AGGTTGTGAC AGCATTGAGT TTTTAGTGTC AACGAACCCT GGTCAGCCGC TACAGCCTAT CGCTAAAGTT GCCTCTGGTG GTGAGCTATC ACGCATCGGC TTAGGTATTC AGGTGATCAC CGCCAAGAAA GTCTCGACGC CTACGTTAAT CTTCGATGAA GTCGATGTGG GAATTTCAGG GCCAACCGCA GCGGTTGTTG GGCGTATGCT GCGTAGCCTT GGCGAGTCGA CTCAGGTCTT TTGTGTGACT CACTTGCCAC AAGTTGCCGG TAACGGCCAT CAACATATGT TCGTCAATAA GAGTAGCAAG GCTGGTCAAA CTGAGACCTC TATGGTGGCG CTAGATAAAA CCCAGCGTAT CGAAGAGTTA GCGCGCTTAT TAGGCGGCGA CACCATCACC AACAACACCT TGGCTAACGC CAAAGAGTTG CTACTAAGTT AA
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Protein sequence | MLCQLSINNF AIVRFLELDF KAGMTSITGE TGAGKSIAID ALGLCLGNRA DANTIRPGAT KAEVSARFLL DDTPAARRWL EDNDLELGDE CILRRTISSD GRSRAYINGN PVPLAQIKSL GQLLIGIHGQ HAHHAMLKSE HQLILLDSYA NHKMLLDSVA ASYHRCKTTE KQLHQLEMSQ QERLARKQLL QYQVEELNEF AINEGEFESI EAEHKKLANS TALIELCRNQ LHILQDNDDG SVESLLNTSI SQGQDLESYD PELASVLAML NDALIQVQES SSEIERYLDG LELDPEYFAH LEQRLSKTMQ LARKHQVMPN ELYTHHQSLL EELEDLGSDS DKLDDIREQL NANREAYLQH ARKLSQSRSR YAKELDKQVT QSIHELNMPK GKFTIAVNFN EAVITPTGCD SIEFLVSTNP GQPLQPIAKV ASGGELSRIG LGIQVITAKK VSTPTLIFDE VDVGISGPTA AVVGRMLRSL GESTQVFCVT HLPQVAGNGH QHMFVNKSSK AGQTETSMVA LDKTQRIEEL ARLLGGDTIT NNTLANAKEL LLS
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