| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1166 |
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| Symbol | nusB |
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| ID | 5661565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1411257 |
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| End bp | 1411664 |
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| Gene Length | 408 bp |
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| Protein Length | 135 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641235718 |
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| Product | transcription antitermination protein NusB |
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| Protein accession | YP_001501028 |
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| Protein GI | 157960994 |
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| COG category | [K] Transcription |
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| COG ID | [COG0781] Transcription termination factor |
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| TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000379162 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGCCTT CAGAGCGCCG TAAGGCACGC CGTTTAGCCG TTCAGGCCAT CTATTCATGG
CAGCTAAGTG GTAACAATAT TGCTGATGTT GAGCATGAGT TTCTAACTGA ACAAGATGTT
GCTGGCGTTG ATATCGCTTA CTTCCGTGAG CTATTAGGTG GCGTTGCAAC TAAGAAGAGT
CAATTGGATG AGCTAATTAC TCCATTCGTG ACTCGTCCAC TCGATGAAGT GGATCCAGTT
GAAAAAGCGA TTGTACGTAT CGCAACTTAT GAACTGACAT TCCGTAAGGA TGTGCCTTAC
AAGGTAGCGA TTAACGAAGC TATCGAGCTT GCAAAAGCAT TCGGCGCAGA AGATGGACAT
AAGTTTGTTA ACGGCATTCT AGATAAGCTG GTAGCACGCA ATAAGTAG
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| Protein sequence | MKPSERRKAR RLAVQAIYSW QLSGNNIADV EHEFLTEQDV AGVDIAYFRE LLGGVATKKS
QLDELITPFV TRPLDEVDPV EKAIVRIATY ELTFRKDVPY KVAINEAIEL AKAFGAEDGH
KFVNGILDKL VARNK
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