| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1159 |
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| Symbol | |
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| ID | 5661558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1403683 |
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| End bp | 1405350 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641235711 |
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| Product | putative ABC transporter ATP-binding protein |
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| Protein accession | YP_001501021 |
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| Protein GI | 157960987 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0545961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCAGT TTGTATATAG CATGCTTAGA GTGGGCAAGA TTGTCCCGCC AAAGAAGCAG
ATCCTTAAAG ATATCTCATT AAGCTTTTTC CCTGGCGCTA AAATCGGTGT CTTAGGTCTA
AACGGTTCAG GTAAATCTAC CCTGCTGCGC ATCATGGCGG GTCTAGATAC TGAAATTGAG
GGTGAAGCGC GCCCAATGCA AGATCTTAAG ATTGGTTACC TACCACAGGA ACCAAAACTA
GATCCAAACC AAACCGTGCG CGAAGCGGTA GAAGAAGCGG TTGCCGAGGC GAAAAACGCG
CTGGTACGCT TAGATGAAGT CTATGCACTT TATGCCGAGC CAGATGCCGA TTTTGACGCA
CTAGCTAAAG AGCAGGGTCA ATTAGAAGCG ATTATTCAGT CTCAAGATGC CCACAACCTA
GATGTGGTAT TAGACAGGGC GGCTAACGCT TTACGTCTTC CTGATTGGGA TGAAAAAATC
GAAGTTCTAT CGGGTGGTGA GCGTCGCCGT GTGGCGATTT GTCGTCTGCT ACTTGAAAAG
CCTGACATGC TATTACTAGA CGAACCAACC AACCACTTGG ATGCGGAATC TGTAGCTTGG
TTAGAGCGCT TCTTACAAGA GTACACGGGT ACTGTTGTGG CGATTACCCA CGATAGATAC
TTCCTCGACA ACGCTGCAGG CTGGATCTTA GAACTTGACC GTGGTGAAGG TATTCCATGG
GAAGGTAACT ACTCTTCATG GCTTGAGCAA AAGGATGCGC GTCTGACCCA AGAGTCAGCC
ACTCAAAGCG CACGCCAAAA AACCATTGCC AAAGAATTGG AGTGGGTACG TCAAGGTGCT
AAAGGCCGTC AATCTAAGGG TAAGGCGCGT ATGGCTCGCT TCGAAGAGCT TAATACCAAC
GACTACCAAA AGCGTAACGA GACTAACGAG CTATTTATTC CACCTGGGCC ACGCCTAGGT
GACAAGGTTA TTGAAATCAC TAACCTGACC AAATCTTATG GCGACCGCGT ACTGATCGAT
GACTTGACCT TCTCTGTGCC TAAGGGCGCC ATCGTCGGTA TTATCGGTGC TAACGGTGCG
GGTAAATCGA CCCTGTTTAA GATGATCTCT GGTGCTGAGC AGCCTGATAG CGGCACAGTA
GAACTGGGTG AGTCGGTACA GATTGCTTCT GTCGAGCAGT TCCGTGATTC GATGAATGAT
AAGAACACGG TTTGGCAAGA GATCTCTGAC GGCCAAGATA TCATGCGTAT CAACAACACT
GAAATTCCAA GTCGTGCCTA TGTTGGCCGC TTTAACTTCC GTGGTGGCGA TCAGCAAAAA
ATCATCGGCA CTCTATCGGG TGGTGAGCGT AACCGTGTGC ATTTGGCTAA GCTGCTGCAA
GCAGGCGGCA ACGTGCTGTT ACTCGATGAA CCAACTAACG ACCTAGACGT TGAAACCTTA
CGCGCACTAG AAGAAGCACT ATTAGAGTTT CCTGGTTGTG CCATGGTTAT TTCACACGAC
CGTTGGTTCC TAGATAGAAT CGCGACTCAT ATCTTAGATT ATCGCGACGA AGGTAAAGTT
AACTTCTACG AAGGTAACTA CACCGAATAC TCTACTTGGC TGAAAGAGAC CATGGGTACC
GATGTAGTTG AGCCACATCG CTTAAAGTAC AAGCGTATGG TTAAGTAA
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| Protein sequence | MAQFVYSMLR VGKIVPPKKQ ILKDISLSFF PGAKIGVLGL NGSGKSTLLR IMAGLDTEIE
GEARPMQDLK IGYLPQEPKL DPNQTVREAV EEAVAEAKNA LVRLDEVYAL YAEPDADFDA
LAKEQGQLEA IIQSQDAHNL DVVLDRAANA LRLPDWDEKI EVLSGGERRR VAICRLLLEK
PDMLLLDEPT NHLDAESVAW LERFLQEYTG TVVAITHDRY FLDNAAGWIL ELDRGEGIPW
EGNYSSWLEQ KDARLTQESA TQSARQKTIA KELEWVRQGA KGRQSKGKAR MARFEELNTN
DYQKRNETNE LFIPPGPRLG DKVIEITNLT KSYGDRVLID DLTFSVPKGA IVGIIGANGA
GKSTLFKMIS GAEQPDSGTV ELGESVQIAS VEQFRDSMND KNTVWQEISD GQDIMRINNT
EIPSRAYVGR FNFRGGDQQK IIGTLSGGER NRVHLAKLLQ AGGNVLLLDE PTNDLDVETL
RALEEALLEF PGCAMVISHD RWFLDRIATH ILDYRDEGKV NFYEGNYTEY STWLKETMGT
DVVEPHRLKY KRMVK
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