| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1126 |
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| Symbol | |
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| ID | 5661525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1363642 |
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| End bp | 1364460 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641235678 |
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| Product | pyrroline-5-carboxylate reductase |
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| Protein accession | YP_001500988 |
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| Protein GI | 157960954 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
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| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000450771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAAA AGAAAGTATG CTTTATCGGC GCAGGCAATA TGACCCGCAG TATCGTCAGT
GGCTTAGTCA AAAGTGGCTA TAGCCCTGAG CTAATCCAAG CCACGAATCC AAGCCAACCT
AAGCTCGATG CTATGGTGGC AGACTTTGGC ATTAAGGTAT CGAATAACAA CCTAGATGCG
GCGCAAGCGG CCGATGTTAT CGTGCTTGGC GTAAAGCCAC ACCTGATGCA AGTCGTCGGC
GAAGAGCTAA GCGGTCTGGA CCTTTCTAAT AAACTGATTA TCACCATAGC CGCAGGCGTA
ACAGCCAAGC GTTATAGTGA TTATTTTAAG CAAGAGATCA AACTAATTCG CACTATGCCT
AATACTCCCA CCCAAATAGG TGTAGGCTTG ACAGGGCTCT ATGCGGGCGA TGACATATCG
GCTGAGCAAA AAGCCATTTG CGAAACCTTA ATGGCAACTG GCGGCGAAGT CGTCTGGGTC
AGTAAGGAAG ATGAATTAAA CCAAGTGATC GCACTTGCGG GTAGCTCTCC AGCATATTTC
TTCCTATTTT TAGAATCTAT GGTAGAAAGT GCAGTGAAAG GTGGCATGTC TGAACTTGCC
GCAAGAGAGA TGGCGCAGCA AGCAGCACTT GGCGCGGCCT TGATGGTCAA ACAAAACCCA
GATGTGAGTC TTGCTCAGCT TAGAGCGAAC GTAACATCAA AAGGCGGCAC AACGGCGCAG
GCGGTTGAGA CGTTTGAAAA AGGTGATTTA AGAGGTTTGG TCGATAATGC AATGAACAAT
TGTATCGCCC GCGCCGAAGA GATGGCCAAG CAGTACTAG
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| Protein sequence | MTQKKVCFIG AGNMTRSIVS GLVKSGYSPE LIQATNPSQP KLDAMVADFG IKVSNNNLDA
AQAADVIVLG VKPHLMQVVG EELSGLDLSN KLIITIAAGV TAKRYSDYFK QEIKLIRTMP
NTPTQIGVGL TGLYAGDDIS AEQKAICETL MATGGEVVWV SKEDELNQVI ALAGSSPAYF
FLFLESMVES AVKGGMSELA AREMAQQAAL GAALMVKQNP DVSLAQLRAN VTSKGGTTAQ
AVETFEKGDL RGLVDNAMNN CIARAEEMAK QY
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