Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1101 |
Symbol | |
ID | 5661500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1334240 |
End bp | 1335136 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641235647 |
Product | ATPase BadF/BadG/BcrA/BcrD type |
Protein accession | YP_001500963 |
Protein GI | 157960929 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2971] Predicted N-acetylglucosamine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0556162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCATGA GCCAGACGAA AGAAGAGTCC CTATATATTG GAATCGATGG TGGCGGCAGT AAGTGCCGTG CAACAATCTA CACTCACGAT TATTGCATTC TAGGCACTGG AGTTGCTGGT CGTGCCAATC CACTTCATGG TTTAGCTCAA ACATTTCAGT CAATTGAAGA GTCTACTCAA TTAGCTCTTA GCGACGCTGG CCTTAAGCCT TCTGATAGTA GACGTTTAAT CGCTGGCCTT GGCCTCGCTG GGGTCAACGT ACCTCGTCTC TACCAAGATA TTGCGAAGTG GCAACATCCA TTTGCCAGCA TGTATTTAAC CACAGATCTT CATACGGCTT GTATCGGTGC CCATCAGGGC GAAGAAGGTG CTGTGACCAT TACTGGCACT GGCTCTTGCG GTTATGCTCG TGTGGGTGAT AAAGAGTTGT TTCTCGGTGG TCATGGGTTT GCTTTAGGTG ATAAGGGTAG TGGCGCTTGG CTTGGTTTAA AGGCGAGTGA GTCGGCATTA TTGGACTTAG ATGGCTTCGG CGAAAAAACT TTATTGACCC AGAGGTTACT GCAACACTTT GAAGTTAGTA ATGCCCTTGG TATTGTCGAA AACTTAGCGG GCCAGTCTTC TAGCACCTAT GCCAAGCTTG CACATATTGT ATTTGAGTGT GCTCGACTAG ATGATGGCGT AGCATTAGAT ATCGTTCGGG AAGGCGCTAA CTATATCAGC CAGCTGGTGA GAAAGTTATT TGAAATTAGC CCGCCTCGAT TCTCTATGAT AGGTGGCTTA GCAGAACCAT TAGCTCCCTG GTTAGCCGAA GATGTACTTG CGAAACTATC TCCAAGCTTG CAGCCACCAG AGTGGGGCGC TGCATTTTTT GCTCAGCAGC AGTATACAAA AGCATAG
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Protein sequence | MGMSQTKEES LYIGIDGGGS KCRATIYTHD YCILGTGVAG RANPLHGLAQ TFQSIEESTQ LALSDAGLKP SDSRRLIAGL GLAGVNVPRL YQDIAKWQHP FASMYLTTDL HTACIGAHQG EEGAVTITGT GSCGYARVGD KELFLGGHGF ALGDKGSGAW LGLKASESAL LDLDGFGEKT LLTQRLLQHF EVSNALGIVE NLAGQSSSTY AKLAHIVFEC ARLDDGVALD IVREGANYIS QLVRKLFEIS PPRFSMIGGL AEPLAPWLAE DVLAKLSPSL QPPEWGAAFF AQQQYTKA
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