Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1084 |
Symbol | lspA |
ID | 5661483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1313634 |
End bp | 1314146 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641235630 |
Product | lipoprotein signal peptidase |
Protein accession | YP_001500946 |
Protein GI | 157960912 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0597] Lipoprotein signal peptidase |
TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAACTA ACTGGAAAGA CAGTGGCCTG CGTTGGTATT GGGTCGTTGT GTTGGTTTTT TTAGCCGACC AACTATCTAA GCAATGGGTA TTGTCGAATT TTGACCTATA TGAGTCGATT CAGTTACTGC CAGTGTTTAA TTTTACCTAT GTACGTAACT ATGGCGCTGC GTTTAGCTTC TTGAGTGATG CTGGCGGATG GCAACGTTGG TTGTTTACCT TCGTAGCAGT TGGCTTTAGC GTATTGTTAT CGGTTTGGCT GCGTCAGCAA CCAAGCAAGA TGTGGCGCTT AAATCTTGCA TACACCTTAG TGATCGGCGG TGCATTAGGT AACTTAATTG ACCGCCTACA ACATGGCTAC GTAGTCGACT TTTTAGATTT CTATTGGAAT ACTAGTCATT TCCCTGCATT TAATATTGCT GACTCGGCAA TTTGTGTTGG GGCAGGACTT ATTATTTTGG ATTCTTTTGT TGCCGGTAAA GACGACAAGA AATCAGATGG TATAAAGGAG TAA
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Protein sequence | MPTNWKDSGL RWYWVVVLVF LADQLSKQWV LSNFDLYESI QLLPVFNFTY VRNYGAAFSF LSDAGGWQRW LFTFVAVGFS VLLSVWLRQQ PSKMWRLNLA YTLVIGGALG NLIDRLQHGY VVDFLDFYWN TSHFPAFNIA DSAICVGAGL IILDSFVAGK DDKKSDGIKE
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