Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1067 |
Symbol | |
ID | 5661466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1291627 |
End bp | 1292562 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641235613 |
Product | homoserine kinase |
Protein accession | YP_001500929 |
Protein GI | 157960895 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0083] Homoserine kinase |
TIGRFAM ID | [TIGR00191] homoserine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTAA CCATTTATGC TCCAGCATCT ATGGGCAATG TCGGAGTCGG TTTCGATCTG CTTGGTGCCG CTTTGGCACC AATAGATGGC AGCCTACTGG GCGATACCGT CAAAGTTGAA TCTGCCGAGC AGGGGCTTTC ACTCGTTCTT GCTGGCCACT GGGCAGGCAA GCTGCCGCAA GATGAGCGAG ACAATATTGT TTATCAATGT GCAGAGTTTT TCTTAAGTCA TTTAGATAAA GATGTAGGCC TTAAGTTGAC CCTAGAGAAG AACTTACCTG TAGGCAGTGG GCTAGGTTCT AGCGCGAGTT CAGTGGTTGC GGCTTTAGCG GCCCTGAACG ACTTCTTCGA TAAACCTTTC TCTGAGCAAG ATTTACTGCG TTTAATGGGT GAGTTTGAAG GCAAGATCAG TGGTTCAATC CATTATGACA ATGTCGCGCC TTGTTACTTA GGTGGTATGC AGCTGATGCT AGATACTCCT AAAACAGTTT GTGAAGCGAT CCCTGACTTT AAACAATGGT ATTGGGTGGT GGCCTATCCA GGGATCTCGC TATCGACTTC TAGAATGCGT CAGTTGATGC CAAGCGAGTT TGATAAGCAG ACCACGATTG ATTTTGGCCG TTATCTCAGT GCGTTTGTGC ATGCTTCATA TAAGCAAGAT GCTGAGCTAG CGATTTCAGT ATTGAAGGAT GTATTGGCCG AGCCTTATCG CGCGCCGGAA ATTCCCAATT ATCAAAAGGC AAAGTCTGCT TTAGCCGAAT TGGGCATGTT AACCACAGGG ATCTCTGGCA GCGGACCGAC GCTGTTTAGT ATTACCGATG ATCTCGATGT GGCCAAACAA GCGCAGCAAT GGCTAGATGC GAACTATGTT GAGCCCGGTA AAGGCTTCTC TCATATATGC AGAATTGATA ATCAAGGGAC TCGTCGAGTC GATTAA
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Protein sequence | MSVTIYAPAS MGNVGVGFDL LGAALAPIDG SLLGDTVKVE SAEQGLSLVL AGHWAGKLPQ DERDNIVYQC AEFFLSHLDK DVGLKLTLEK NLPVGSGLGS SASSVVAALA ALNDFFDKPF SEQDLLRLMG EFEGKISGSI HYDNVAPCYL GGMQLMLDTP KTVCEAIPDF KQWYWVVAYP GISLSTSRMR QLMPSEFDKQ TTIDFGRYLS AFVHASYKQD AELAISVLKD VLAEPYRAPE IPNYQKAKSA LAELGMLTTG ISGSGPTLFS ITDDLDVAKQ AQQWLDANYV EPGKGFSHIC RIDNQGTRRV D
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