| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1059 |
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| Symbol | |
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| ID | 5661458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1282497 |
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| End bp | 1284470 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641235605 |
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| Product | chorismate mutase |
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| Protein accession | YP_001500921 |
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| Protein GI | 157960887 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0077] Prephenate dehydratase
[COG1605] Chorismate mutase
[COG2876] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR01797] chorismate mutase domain of proteobacterial P-protein, clade 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.850871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAC CACAACCCTT AAACCACACT CGAGAGCAGA TCACTAGCCT CGATAATGAA
CTACTGGCCC TGCTTGCTAA GCGCCGTGAA TTAAGTTTAG ATGTCGCCCG CAGTAAAGAG
GTTGATGTTA GGCCTATACG CGATACCATT CGAGAAAAAG AGCTGTTATC TCGCTTGGTG
AAACAAGGCC GAGAACAAGG TTTAGATGCC CACTACGTTA TATCTCTTTA TCAAAGCATT
ATCGAAGACT CTGTACTTAA CCAACAAGCC TATTTGCATG GCCGTGCAAA CCCAGAAACT
CAACAGCAAC AATATTGTAT CGCCTACTTA GGGGCGCGCG GCTCTTATTC ATATCTTGCA
GCGAGTCGTT ACTGCGATAG ACGCCAAGTA GAGATGCAAG ATTTAGGCTG CCAAAGTTTT
GATGAAATCG TTCAGGCCGT CGAATCTGGT CACGCGGATT ATGGTTTCCT ACCCATTGAG
AACACTTCAT CAGGCTCAAT CAACGAGGTT TATGATGTGT TACAGCACAC CAGCCTTGCC
ATTGTCGGTG AAACCACTAT TGAAGTTGGC CATTGTTTAT TAGCAAAGAG CGGCAGCAGC
ATTAACGATA TCAAAACCGT TTACGCCCAC CCACAGCCAA TAAGTCAGTG CAGTCGATAC
CTGAGCCAAC ATGGTGAATT CAAACTCGAG TATTGCTCAA GCAGCGCAGA AGCGATGGAG
ATGGTATGCA ATGCTAATGA TAACAGCGTG GCTGCTATCG GCAGCGCTGA AGGTGGCGCT
CTATATCAAT TAGAAGCCGT TGAAAGTGGA CTTGCCAATC AAAAAATCAA TCAAAGCCGC
TTTATTGTTG TTGCAAGAAA AGCTGTTGAA GTGCCTTCTC AGCTTCCAGC TAAGTGCACA
CTGATTATGG CGACAGGGCA AAAGCCTGGC GCATTGGTTG AAGCCTTACT CGTACTTAAA
GCCCGAAACC TTAATATGAG CAAACTCGAG TCGCGTCCAA TTCCTGGTAC CCCATGGGAA
GAGATGTTCT ATCTCGATAT TGATGCCAAC TTGTCGAGTG AGCCAATGCA GGCAGCGCTG
AAAGAGTTAG AAAGAACCAC TCGCTTTATC AAGGTGCTTG GCTGCTACCC ATGTGAAACG
GTTAAACCAA CTCAACTAAG TAATAGTCAA TTAATGATAG AGCCTGACAC TTCTAAGTCG
ACCACGGTTA CCGCTACGCC GCCAAACAAA CAGATGCGCG TGAGTAAGCA ATACAAGAGT
GAGTCAACTC AAGTGATTTG CGGCCAACTG AGCCTTGGTA ATGGTAACTT AGGAGCTATA
GCTCAAGTAC AACTGCCACT CGATTTACAG CAATTTGAAC AAATGGCAAA AGAGCTTAAA
GAGTCTGGAT TCCAGGCGGT TGTTATTCAG GGCTTGAGTC AGCAGAGTGA TCTTATTAGC
TCGATAGAAA AGTTTAAGCA TGCCCTAGGC CAATTCAATC TAGTTTGTGT GTTAGCTATT
GAGCACGAAA CAGATTTAAG CATGGCAATT CAATTTGCCG ATGTGGTGAT GCTTGCAGGT
AACTTGATGT ATAACCAAGC CATACTAAGC CAACTCGGTA GCTTACTGGT CCCGGTCATT
TTAGAGCGTA ATGCAATGGC AAGTGTAGAT GACTTGCTTA ATGCCGCTGA AGAAGTTTTA
AGTCAGGGCA ATCAGCAGCT TATACTTTGC GAGTCAGGCG TAACCACACT TAACAATTCA
GGCAAACCAT CGCTAGATTT GGCCGCATTA GTTGAGTTAA AAGCCCTAAG TCACTTACCG
GTTGTTGTTA ACCCAAGTTA TGCCATTGAT ACCGATCAGC TAGCAACATT TGCTAAAGCA
ATTAAGCAGC TTAAAGGTGA TGGTGTCATG ATGAACCTAA GCGCGATAGA TACAGCGGCT
CAGGCTCATC CAGAGGAACT CGTTAAAGCA GTATTAGGTA ATTTGTACCA CTAG
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| Protein sequence | MSKPQPLNHT REQITSLDNE LLALLAKRRE LSLDVARSKE VDVRPIRDTI REKELLSRLV
KQGREQGLDA HYVISLYQSI IEDSVLNQQA YLHGRANPET QQQQYCIAYL GARGSYSYLA
ASRYCDRRQV EMQDLGCQSF DEIVQAVESG HADYGFLPIE NTSSGSINEV YDVLQHTSLA
IVGETTIEVG HCLLAKSGSS INDIKTVYAH PQPISQCSRY LSQHGEFKLE YCSSSAEAME
MVCNANDNSV AAIGSAEGGA LYQLEAVESG LANQKINQSR FIVVARKAVE VPSQLPAKCT
LIMATGQKPG ALVEALLVLK ARNLNMSKLE SRPIPGTPWE EMFYLDIDAN LSSEPMQAAL
KELERTTRFI KVLGCYPCET VKPTQLSNSQ LMIEPDTSKS TTVTATPPNK QMRVSKQYKS
ESTQVICGQL SLGNGNLGAI AQVQLPLDLQ QFEQMAKELK ESGFQAVVIQ GLSQQSDLIS
SIEKFKHALG QFNLVCVLAI EHETDLSMAI QFADVVMLAG NLMYNQAILS QLGSLLVPVI
LERNAMASVD DLLNAAEEVL SQGNQQLILC ESGVTTLNNS GKPSLDLAAL VELKALSHLP
VVVNPSYAID TDQLATFAKA IKQLKGDGVM MNLSAIDTAA QAHPEELVKA VLGNLYH
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