Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1034 |
Symbol | |
ID | 5661433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1256668 |
End bp | 1257132 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641235580 |
Product | positive regulator of sigma E, RseC/MucC |
Protein accession | YP_001500896 |
Protein GI | 157960862 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3086] Positive regulator of sigma E activity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00221159 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGAAG AAATCGCTAG AGTTGTCGCT AATGGCAACT CTGGTTGGGT CGTTGTTGAA GTTGAGATGA AGAGTGCCTG TAATCATTGT GAAAGCGGTG ATTCTTGTGG CACATCTGCC GTTTCAAAAG CCTTTTCGCC TAAAGTACAA CGTTTTTCAA TTCAGAGTGA TCGGCAGTTT GTTAAAGGCG AGCGCTTAAA ACTGGGTTTA CCGGAAAGCG TAATCTTAAA AGCAGCAACC TTAGTCTATA TTTTACCGCT TATTGGGTTG TTTATTGGCG CTTTCAGCGC TAATCAAATC GGCTCTTTAA TAGGAAGCGC TTCTGAACTG TTATCTATTT CGGGAGCATT AGTCGGTAGT TTCTGTTTCT GGGCTGTCGG AAAAAAAGCG GCCAAGAGAT TAGAAGCGCA GGCGCAGCCT GTCATTATCA AGTCTCTGGG CAAGCCTATC GAGATAGCTA ATTAG
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Protein sequence | MMEEIARVVA NGNSGWVVVE VEMKSACNHC ESGDSCGTSA VSKAFSPKVQ RFSIQSDRQF VKGERLKLGL PESVILKAAT LVYILPLIGL FIGAFSANQI GSLIGSASEL LSISGALVGS FCFWAVGKKA AKRLEAQAQP VIIKSLGKPI EIAN
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