| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1033 |
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| Symbol | |
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| ID | 5661432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1255722 |
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| End bp | 1256654 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641235579 |
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| Product | sigma E regulatory protein, MucB/RseB |
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| Protein accession | YP_001500895 |
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| Protein GI | 157960861 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3026] Negative regulator of sigma E activity |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0190617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCGTCTAA TCCTATTGGC TATTATAGCC ATGAGTTTTC CCGCGATGGC GCGGGAAGAC
ATGCCCGCCA AAGCTTGGCT AGAAAATATG AGCCAAGCCC TGCGTGAACA AGAATTTAAA
ATTTCCCTTA TCCAACTTCA GGCAGACCAT ATCCGCCCTC TGGTTTATAT ACACGGTAAA
GTTGAAGATG AAGAAGTGGC CTTTTTAGAA CATCTAAATG GACCACCTAA AAATGCTGTG
CGTGTGGGTA ATACCGTGAC CTTCATTGAG CATGACCAAC CCGCTTATAG TGTTCACTCT
AATCGCATTC AGGGCGTTAT CCCTGGAGCA TTAGCCGACG ATGTCTCCAA GCTGGAAGAG
GGCTATCAGT TCGTGTTGGG TGGTCGTAGC CGAATTGCAG GTCGACCAGG TCAGCTTGTA
CGTATCATTC CGACCGACAA TAACCGTTAT GGTTATCAAG TTTGGATGGA TATGGATACA
TACTTGCCGC TGCGTTTCGA CATGATAAGT GGTGACAAAC AACTATTAGA GCAGCTGTTA
GTGGTTGAAC TATTAGTGCT TGATGAAGTA CCTGCTATTC TAAAAGAAGC CTACAAGCAG
GAGTGGCCTC CTGTCTTGTC TCAATCAGAC AGAGACGGCG GCGAAGACTG GCAGTTTAGC
TGGTTACCAG CAGGCTTTAA GGTGCTGATT AAAGATCAAC ACAGGCTAAT AGGCAGTAAG
GAAGCGGTTG AGTACATAGC CATAAGTGAT GGTCTAGCTC ATATTTCTGT TTACGTTGCC
AAGGCGGGGG AGGCACCACT GCCAGAGGAG TTAGTGACCC GCAATGGATT ATCACTTGCA
ACAGAGCGAG TTGGTAATGC CGAGGTGGTT GCAGTGGGTA AGGTTCCTGC TGAGACCTTG
AGTCGCATTG CTAAAAGCAT CATGTTGCAG TGA
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| Protein sequence | MRLILLAIIA MSFPAMARED MPAKAWLENM SQALREQEFK ISLIQLQADH IRPLVYIHGK
VEDEEVAFLE HLNGPPKNAV RVGNTVTFIE HDQPAYSVHS NRIQGVIPGA LADDVSKLEE
GYQFVLGGRS RIAGRPGQLV RIIPTDNNRY GYQVWMDMDT YLPLRFDMIS GDKQLLEQLL
VVELLVLDEV PAILKEAYKQ EWPPVLSQSD RDGGEDWQFS WLPAGFKVLI KDQHRLIGSK
EAVEYIAISD GLAHISVYVA KAGEAPLPEE LVTRNGLSLA TERVGNAEVV AVGKVPAETL
SRIAKSIMLQ
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