| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1016 |
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| Symbol | |
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| ID | 5661415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1238980 |
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| End bp | 1239915 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641235562 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001500878 |
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| Protein GI | 157960844 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.217718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTGG TAATCTATTT TATGAAACAT CTCCCCAGTT TAAAAAACCT GTTCTATTTG
GTGAATCTGC ATCAAGAGCA GAATTTCAAT AGAGCCGCCA AAATCTGCCA TGTTAGTCAG
TCGACCTTGT CTAGCGGTAT TCAAAACCTT GAAGAGCAGT TGGGGCACCA ACTTATTGAA
CGTGATCATA AATCTTTTAT CTTTACCGCT ATCGGTGAAG AGGTCGTGAT GCGCTCGCGC
AAATTATTGA CCGATGTAGA TGATCTTGTC GAGCTGGTTA AACACCAGGG CGAGCCTATG
ACGGGGGAGA TTCGTTTAGG TTGTATTCCA ACGATTGCGC CTTTCTTATT GAGTAATGTG
GTTCAGCATT GCAAACAGAC TTATCCAGAC TTAACGCTGT TTTTAAAAGA AGACACTACA
GATAGATTGA TAGATGCACT GAGCAAAGGT GAATTAGATC TGTTGTTGTT AGCCCTTCCT
GTAGACACCA GTGGCTTTCA TAGCATGAAG GTCGGTATTG ATCCGTTCAA GATGGTGGTG
CATAAAGATT TAACCGATGA GATCCACGAG CCGATTGACT ATCAAGACCT GCCCGATGAA
AGCATCTTCC TACTGCAGGC TGAGCACTGT ATTACTGGAC ATGCGATTAC AGCTTGCCAG
TTAGGGGAGA GCGTTAAGAT TAATCCATTT GCGGCGACGA GTCTGCATAC CTTAGTGCAG
ATGGTTAACT GTAAGCTCGG TACCACCTTC TTGCCACAGA TGGCAATTGA TGCGGGTATT
TTAAATAATA CCGACCTGAC GACTATGGCG CCACCGGGGG AAACTCCTTA TCGAGATATC
GGCCTAGTTT GGCGTCAAAC GTCTAGCAGA ATTTTGACCT TTAGAACCTT GGGGTTAGAG
ATCCAAAAGC TGTTGGGTCA AGAAGACGCG ATATAA
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| Protein sequence | MSLVIYFMKH LPSLKNLFYL VNLHQEQNFN RAAKICHVSQ STLSSGIQNL EEQLGHQLIE
RDHKSFIFTA IGEEVVMRSR KLLTDVDDLV ELVKHQGEPM TGEIRLGCIP TIAPFLLSNV
VQHCKQTYPD LTLFLKEDTT DRLIDALSKG ELDLLLLALP VDTSGFHSMK VGIDPFKMVV
HKDLTDEIHE PIDYQDLPDE SIFLLQAEHC ITGHAITACQ LGESVKINPF AATSLHTLVQ
MVNCKLGTTF LPQMAIDAGI LNNTDLTTMA PPGETPYRDI GLVWRQTSSR ILTFRTLGLE
IQKLLGQEDA I
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