Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1014 |
Symbol | |
ID | 5661413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1237298 |
End bp | 1238227 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641235560 |
Product | putative radical SAM protein |
Protein accession | YP_001500876 |
Protein GI | 157960842 |
COG category | [R] General function prediction only |
COG ID | [COG1242] Predicted Fe-S oxidoreductase |
TIGRFAM ID | [TIGR01212] radical SAM protein, TIGR01212 family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.531424 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGGACTGG ATAGTTACGT AAATACCTTC GGCGGTGTGT GTAAGCAAAA ATATGGCGAG CGGATCCGTA AGCTGACAAT CGATGCAAAA TTTACCTGCC CTAATCGTGA TGGCACTTTG GGTAAGGGGG GGTGCACCTA TTGCAATGTG GCATCCTTTA GTCATGAGCA TAAGACCGAG CTATCTATTC AAGAGCAACT GGCTCAAGGC AGAGAGCGAT TACCCTCTAA ATCGTCTAAG TACATCGCTT ATTTTCAGGC TTATACCAGT ACATATGATG AGTACCTAGT ATTAAAGCAA AAGTACGATG AGGCAATTCA GGACAGCGAT ATTGTGGGCC TTTGTGTCGG TACTCGCCCT GATTGTGTTC CCAATGAGGT GCTAGAGTTA TTAGTCGGCT ATCAAAATGA TGGTGTCGAT GTCTGGTTAG AGCTTGGCTT GCAATCGGCT AATGATGCTA CGCTGAAGAA GATCAATCGC GGCCATGATT TTGCCGCTTA TGAAGATACG GTTATCCGTG CCCGTAAGCT TGGCATAAAA GTATGTACCC ACTTGATCTT GGGATTACCG GGTGAAGCTC ATGAGGATTA TCTGCAAACA CTTGATAAGG TATTGAGGGT TGGTGTTGAT GGAATGAAGA TACATCCACT GCACATTGTT GAAGGCAGCA CCATGGCTAA AGCATGGCGC AATAATAAGA TGAGTCTGCT TGAGCTAGAG GATTATGCTT ATAGCGTTGG TGAGTTGATC CGCCGAACTC CTAAAGAGGT AATTTTCCAT CGAGTGACAG CTTATGCGAA AAAGCCAATG CTGTTAGGGC CTGATTGGTG TGCTTATCGA TGGAATGGGC TCGTCGCTAT CGTTGATGAT CTAGAAGCGA AAGGCGGTCA AGGGGCTTAT CTTGAGATAG GGCAAGAGCC CGCGGCGTAA
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Protein sequence | MGLDSYVNTF GGVCKQKYGE RIRKLTIDAK FTCPNRDGTL GKGGCTYCNV ASFSHEHKTE LSIQEQLAQG RERLPSKSSK YIAYFQAYTS TYDEYLVLKQ KYDEAIQDSD IVGLCVGTRP DCVPNEVLEL LVGYQNDGVD VWLELGLQSA NDATLKKINR GHDFAAYEDT VIRARKLGIK VCTHLILGLP GEAHEDYLQT LDKVLRVGVD GMKIHPLHIV EGSTMAKAWR NNKMSLLELE DYAYSVGELI RRTPKEVIFH RVTAYAKKPM LLGPDWCAYR WNGLVAIVDD LEAKGGQGAY LEIGQEPAA
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