Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0957 |
Symbol | |
ID | 5661356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1166653 |
End bp | 1168824 |
Gene Length | 2172 bp |
Protein Length | 723 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641235502 |
Product | gluconate 2-dehydrogenase (acceptor) |
Protein accession | YP_001500819 |
Protein GI | 157960785 |
COG category | [C] Energy production and conversion |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.12457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGTTT TCTGGAATAT TTGGGTCGTT GGGTTTATTG CTATCTTTCT AATTTTTATG GCGTTAGTCA TTGTTAAATA TTGGCGCGAT AACCATAGTG CCGATAAAAA TAAAACCATC GATACCTTCG ACGGTATTGA TGAGAATGAT GCGCCGCCAC CTCGCTTACT GTTTATCTCC TATTTAGTCG CTTTTGCCAT TTCTGCAGTT TTTCTCGTGC TTTACCCTGG TCTTGGTAAT TGGAAAGGCT TAATGGGCTG GCAGCAAAGT GATGATGCCT TAAGCTCACC AGTTACCGAC TTAACGATGG AAATGGCAAC ACTAAATGAT AAAAGCTTGC TAGCACTTGC GAATAACAAA ACGGTGACGG CAAGCGGAGC ATCGCTATTT GAAAACCATT GCGCAGCATG CCATAGACGT AATGCTCAGG GGCAAAAGCA CTTTCCAAAT CTAATTGATA ATGAGTGGCT CTACGGTGGT ACGCAGAGTG ATATTTTAGA CTCGATAAAG AAAGGCAGAC ACGGGGCAAT GCCCGGTTGG AAAGGGGTTT TGTCAGAAGA CCAGATCACT AAAATGGCGT ATTACATCGC GTCACTGCAA CCTAAGCGTC GTAACCTAAA TGCGCCGCAG GTTAAAATCG ATCTAGGTAA AGACATTTTT GCCGAGTATT GCGCCAGTTG TCATGGTGAT GGCACTGTGG CAAATACTCA AATTGGTGCC CCTTTACTTA ACGATGCTAT CTGGCTTCAT GGCGGTAGCA TCGAAGAGAT TAAGCACACT ATAGATTTTG GTTTGAATAA CTTGATGCCT GCATTTGAAG AGCAGCTGAC AGCTGATGAG ATCTTGGCTA TTGGTGCTTA CATTACTGAA CAACGCCTTG AATACGATGC CAAACTCGCA GCACTTGATC CTGAGTCAGT AAAGCGTGGT GAATACCTAG TTAATGCAGG CGATTGTGTT GCCTGCCATA GCTCAGAAGG CGGTGAGCGA TTCGCGGGTG GCTTGCCATT CAAAACACCT TTTGGCACGG TATATTCAAC CAATATTACC CCCCATGTGA GTGAAGGCAT TGGTAGCGAC AATTATGCCG ACTTCAAAGC GGCGTTATTT GATGGTAAAG GCCGCCATGG TTATCTCTAC CCTGCAATGC CTTACACCTC TTATCAATAT TTAAAAGAGC AGGACACCCA AGATCTGTGG AGCTATTTGC AGTCGATTAC AGCAGTCGCA AGGCAAAACG ATAAGAATGA GATGATCTTC CCGTCGAATA TCCGTACCGG ATTATTAGCT TGGAATTTGG TGTTTATGGA TACCAATCCA CTTTCTTATG AGGCGCCCAA GCATGCTCAA CTCACTGAGC AAGAGTTAAA GGAGTGGCAA CGAGGTAAAT ACTGGGTGAT GGGGCTCGGG CATTGTAGCG AATGTCATAC TCCACGAAAT TTAGCTCAGG CATTAATACC TGAACAAATA TTCCAAGGTA ACTTGATTGA TGGTTGGAAC GCCCCAGATA TCAGCGCCAA AGAGCTCTAT CAAGATAGAT GGGATATCGA GTCGTTAACT GACTTTTTGC ACACAGGGCA CTCGTCTAAA GGCTCTGCAT TTGCTGGTAT GGCAGATGTA GTGAAAAACA GTACTAGTTT AATGACACGC AAGGATATTA GGACTATCTC TCGTTACCTG CTAGTGGGGG ATAAGAACAA CACCATTCCA GCTAATACTA AGCAACTTAA CCCAGCAGGC TTTACCCAAG AGGCGTATGC CGATAAGCAG TTTAATGCTT ATTCATTGTA TGCAGAGACT TGTGGAGCCT GTCATGGTGA AGATGGTAAA GGTCGTGACC CCATAGCGCC AACCTTATTG AATAACGGCA TTATCATGCA CAGTGACCCG TTCAATACGA TAGCGGTGAC GATACGTGGA CTTTCGCCAA CGTATTTAGA TGAAGAGCGT AACTTCATGC CGATGACTAG TTTTCAAAAT GTATTGACCG ACACTGAGCT GGCTAATCTT ATTAGTTTTG TACGCTACTA TTTAGGCGAT AGAAAAGAGC CCGTTACCGC AGAGCAAGTT AAGGCTGTGC GTCAACAACT CGAAAAGGCA GGTTTTGCAG GTAATCTACA CACCACGCCT GATATGTATG ACCACAAAGA TGGTGATATT GATATCGACT AG
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Protein sequence | MTVFWNIWVV GFIAIFLIFM ALVIVKYWRD NHSADKNKTI DTFDGIDEND APPPRLLFIS YLVAFAISAV FLVLYPGLGN WKGLMGWQQS DDALSSPVTD LTMEMATLND KSLLALANNK TVTASGASLF ENHCAACHRR NAQGQKHFPN LIDNEWLYGG TQSDILDSIK KGRHGAMPGW KGVLSEDQIT KMAYYIASLQ PKRRNLNAPQ VKIDLGKDIF AEYCASCHGD GTVANTQIGA PLLNDAIWLH GGSIEEIKHT IDFGLNNLMP AFEEQLTADE ILAIGAYITE QRLEYDAKLA ALDPESVKRG EYLVNAGDCV ACHSSEGGER FAGGLPFKTP FGTVYSTNIT PHVSEGIGSD NYADFKAALF DGKGRHGYLY PAMPYTSYQY LKEQDTQDLW SYLQSITAVA RQNDKNEMIF PSNIRTGLLA WNLVFMDTNP LSYEAPKHAQ LTEQELKEWQ RGKYWVMGLG HCSECHTPRN LAQALIPEQI FQGNLIDGWN APDISAKELY QDRWDIESLT DFLHTGHSSK GSAFAGMADV VKNSTSLMTR KDIRTISRYL LVGDKNNTIP ANTKQLNPAG FTQEAYADKQ FNAYSLYAET CGACHGEDGK GRDPIAPTLL NNGIIMHSDP FNTIAVTIRG LSPTYLDEER NFMPMTSFQN VLTDTELANL ISFVRYYLGD RKEPVTAEQV KAVRQQLEKA GFAGNLHTTP DMYDHKDGDI DID
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