| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0952 |
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| Symbol | |
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| ID | 5661351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1161738 |
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| End bp | 1163015 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641235497 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_001500814 |
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| Protein GI | 157960780 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAACCA ATGAGTCACT TATGGTGCGA CGCCAAGCCG CTGTAGCCAA TGGCGTAGGG
CAAATTCACC CTATCTATAC TCAGCGTGCC GATAACGCCA CCGTGTGGGA TGTAGAAGGG
CGCGAGTTTA TTGACTTTGC TGGTGGTATT GCGGTGCTCA ATACTGGCCA CTTGCACGAT
AATGTTAAGG CGGCGGTAGC AGAGCAACTG GAGCTGTTTT CCCATACCTG CTTTATGGTG
CTGGGCTATG AGAATTATAT CCAGGTGTGC GAGAAGCTTA ATCATCTTGT GCCCGGCGAT
TTTGCTAAGA AAACAGCGTT GTTCACCAGT GGTTCAGAGG CGGTTGAAAA CGCGGTGAAG
GTGGCGCGGG CTTATACTAA ACGCAGCGGT GTTATTGCTT TTACCTCGGG TTACCATGGG
CGCACCATGG CGGCGTTAGC GCTAACGGGC AAGGTCGCAC CTTACAGTAA AGGTATGGGG
CTGATGTCGG CCAATGTGTT TAGAGCCGAG TTTCCTTGTG AGCTGCATGG GGTGAGCGAT
GAGGATGCCA TCTCATCCAT AGAGCGAATC TTTAAAAATG ATGCCGAGCC CGATGATATT
GCAGCAATTA TTATCGAGCC AGTGCAAGGT GAGGGCGGTT TTTACCATAC CTCAGTCGAG
TTTATGCAGC GTTTACGTCA GTTATGCGAT AAGCACGGCA TCATGCTGAT CGCCGATGAA
GTACAAACAG GCGCGGGGCG AACGGGTACC TTTTTTGCTA TGGAGCAGAT GAAGGTGAGC
GCGGATATTA CTACTTTTGC TAAGTCTATC GCCGGAGGTT TCCCGCTGTC AGGGATCACC
GGCCGAGCCG AAGTGATGGA CTCTATTGGT GCGGGTGGCT TAGGCGGTAC CTATGGTGGC
AGTCCGTTAG CCTGCGCTGC AGCGCTTGCC GTAATTGAGG TATTTGAAGA GGAACAACTA
CTGCAAAGAG CCAATGCGCT TGGTGCTAAG CTCAAAGAGT CGCTTAACGC GATGGCGAGT
AAGCATGAGC CAATTGTCGA TGTACGCGGT CTTGGTGCCA TGATAGCGGT TGAGTTGATG
CAAGAAGGTA AGCCTGCGCC AGAACTGTGC GCGCAAATAC TCAAAGAGGC ACGTGATAGA
GGACTTATCC TGCTATCTTG CGGCACTTAC GGTAATGTAC TGCGCATTCT TGTACCGCTA
ACAGCTCCCG ATGAGCAAAT CGATAAAGGA CTGGAGATCA TTCAGTCTTG CTTTGAAGTG
GTCTTGAAGC CCGCTTAA
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| Protein sequence | MTTNESLMVR RQAAVANGVG QIHPIYTQRA DNATVWDVEG REFIDFAGGI AVLNTGHLHD
NVKAAVAEQL ELFSHTCFMV LGYENYIQVC EKLNHLVPGD FAKKTALFTS GSEAVENAVK
VARAYTKRSG VIAFTSGYHG RTMAALALTG KVAPYSKGMG LMSANVFRAE FPCELHGVSD
EDAISSIERI FKNDAEPDDI AAIIIEPVQG EGGFYHTSVE FMQRLRQLCD KHGIMLIADE
VQTGAGRTGT FFAMEQMKVS ADITTFAKSI AGGFPLSGIT GRAEVMDSIG AGGLGGTYGG
SPLACAAALA VIEVFEEEQL LQRANALGAK LKESLNAMAS KHEPIVDVRG LGAMIAVELM
QEGKPAPELC AQILKEARDR GLILLSCGTY GNVLRILVPL TAPDEQIDKG LEIIQSCFEV
VLKPA
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