| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0948 |
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| Symbol | |
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| ID | 5661347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1156963 |
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| End bp | 1157868 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641235493 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001500810 |
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| Protein GI | 157960776 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAGC CGTTAAAATT TCGATTACCC AAAGGCCAAT GTTGGACCAT AGGTGTCCCA
TACTTTTGGC TACTGATGTT CTTCGCACTA CCTTTCGCTA TTGTACTTAA GATCAGTTTC
TCAACCCCTA TCATCTCGAT ACCGCCTTAC GAGCCATTGT TTCAGTATGC AGAAGAATCG
CTGCAGATCA TGCTCAACTT GGGCAATTAC TTGCTCATTC TCGATGATTC CTTGTACTAC
AACGCTTATC TAAGTTCACT TAAGATGGCG ACTATCTCAA CCATAGGCTG TTTACTCATA
GGCTATCCGA TGGCCTATGC CATTGCTCGT GCGCCTAAGC GTAACCAAAC CATGTTAATC
CTGTTGGTGA TGTTACCTTC TTGGACCTCT TTCCTTATCC GGGTTTACGC CTGGATGGGC
ATATTGAGCA ACAATGGTGT GATCAATAAC TTGTTGATGT GGACCGGCAT TATCTCCGAG
CCTTTGCAGA TCTTAAATAC CAATACCGCG GTCTATATAG GCATTATCTA CAGCTATTTG
CCGTTTATGA TCTTGCCGCT GTACGCCAAC CTGTCTCAAC TCGATGGTAG CTTGCTAGAG
GCGGCTGCAG ATCTCGGTTC TCGCAGTCTC AATACTTTCT GGAAGGTGAC GCTACCGTTA
TCGAAAGGCG GGGTGATTGC TGGCTCTATG TTGGTGTTTA TTCCTGTGGT AGGTGAGTTT
GTGATCCCAG AGTTACTCGG TGGCCCAGAC TCATTGATGA TAGGTAAGAT TCTTTGGCAA
GAGTTCTTCA ATAATCGTGA CTGGCCGGTG GCCTCCGCGC TTGCGATTGT GATGTTAGGG
CTACTGATTA TCCCGATAAC CCTGTTCCAC CGCTATCAGG CTAAAGAGAT GGAGAAGACA
GCATGA
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| Protein sequence | MKKPLKFRLP KGQCWTIGVP YFWLLMFFAL PFAIVLKISF STPIISIPPY EPLFQYAEES
LQIMLNLGNY LLILDDSLYY NAYLSSLKMA TISTIGCLLI GYPMAYAIAR APKRNQTMLI
LLVMLPSWTS FLIRVYAWMG ILSNNGVINN LLMWTGIISE PLQILNTNTA VYIGIIYSYL
PFMILPLYAN LSQLDGSLLE AAADLGSRSL NTFWKVTLPL SKGGVIAGSM LVFIPVVGEF
VIPELLGGPD SLMIGKILWQ EFFNNRDWPV ASALAIVMLG LLIIPITLFH RYQAKEMEKT
A
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