Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0909 |
Symbol | |
ID | 5661308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 1110408 |
End bp | 1114409 |
Gene Length | 4002 bp |
Protein Length | 1333 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641235454 |
Product | Hpt sensor hybrid histidine kinase |
Protein accession | YP_001500771 |
Protein GI | 157960737 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0784] FOG: CheY-like receiver [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.257325 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCAAG CGCTACTGAT ACTAATTCTA TTTTCTCTGT CTTTTTCTGC GATAGCAGGT CAAGCAAAAA ATGACACCGC CGCGGCCACT GAAGGTCGAG TGGTTAGGGT CGGCTACCCA GCCGCGGATT GGCAGCCTTT TACTTATGTC AGTAAAGATG GAAAAGTCAT CGGCTTACTA CCATCCATTC TGCAAGAGAT CACCATAAAT ACCGGCTACC GCACAGAGAA TGTAATCTAT CCGAACTATG AAGAAGTTAC TCAGGCTCTA CGCCAAGGTG AAATTGACAT CATCATGGGA GTATCAAAAA CTCCCAGCCG CTTGACTTGG CTAAGCTTTA GCTCACCACT CATGCTGGTA CCTATTGCAG GTATCACTAA TCAGAAAAAT ATTAACAATC TATTAGAGCT AAAAGGTCAG CGCATCGCTG CAGAAAAAGG TTTCGCGATA AATGAACAGC TTAGAAGTTC AGCCAGCCAA GTCGAAGTTC ACAGCGCTCC CGACAGCCTC GCAGCTTATA AATCTGTTTT AACAGGAAGC TCAGATGCAT ACATAGGTAA TGCGATTACC CTTGATTACC TGCATACCCA CCAGGATGCA CCTAATGAAC TGTCTATACG CCTGCTGGCT GATGTGCCCT TTGAGAGATT GCACCTTGCG AGCCAACTAA AAGACACCGA GCTCGTTAAT CAGCTAAATG AGGGGCTAAA ACAGATCCCA AGTGAGACTT TTAAGAAACT CTATGACGCC TGGCTGACAA CCTCTCAAGT TAAATATATT TACCAGCAAC ATAGTCTGAA CTTAACTGAA GAGGAAATCG TAACCATTAG TGAGAAGAAA ATCATTAAGG TACTTTACTC TACAGATAAT TATCCTTATT CCTTTATCAA TGGTAAAGGT GCAATGGATG GTATGGGTCC AGAGCTCTTA AAAATAGCAG CCCAAAAGTT AAATATAACG ATTGAAGCCA CGCCGTTTAA TGGAAATGAT ATTGAGGGAC ATCTTGCCTC GAATAGCTTC GAGATCATCC CATCCTATAC TTGCGACCAT AACATTTTAC AGCTTATACA CTGCACTTCG CCTTACATAC AAGATCGCTT GATTGGGGTT GCAGCAAGTA ACTTAACCAG CGCACAACTG GAGAACAGTA CCAAATTAGG CTTACTAAGA CGTCACAAAC AACAAATGAA TACGTCTAAG GATTTTCCTG ATGCAGATAT CACTTATTTT GCTTCAACAA AACTGCTGAT AAACGCTGTC ATTAAAGGTC AGATACAAGT TGGCATCATC CCTTTATCAA AGGCTAATTC TTTAGTCAGT TCAAAGTATT TAGGTCGAAT AAATATTATC CCAAACCCTT TGGGTAAACA AACTCACCCG GTGAGTTTTG GTGTTAATAA GAATAACCCT ATTCTGCTGT CAATCTTGAA TAAAGCAAAA AACTCCATTC AAGAAGATGA GTTACGTACC ATCATCAATA AATGGCATGA TATCAATATC AACAGTGACT TTACCTTTGC TAAAGTACCA AACTGGCTGC TGTTAGTGCT AGGGGGAGTT TTCAGTACTT TTTTGGCCAT AGCTTACTCC AATAGAAAAC TAAAAAATGA AATAGCGCAG CGGCACAGCA TCGAAAAAGA GCTAAGGTTG GTTAATAGCA ACTTTGGTGG CATAGTTGCA CAGTTAGTAC GCTATGGCGA TGATGTTAAT GACATTTCTT GGAGCTATGT TAGCGGCAAT ATTGAGAAAT ACTTGGGTTT GACACCGGAA CAACTCTATC AAACACCACA ACTGCTTTTA GAGTTTTTAC AGACACACGC TGATGATCAT GAGTTTTTAA ATGATATACA GCAGTCTCAC CTTTCTGATT CTCTCTACAC AACCCTCAAG CTTAACATTG ACGGTAAGCT CTCTTGGTTC CAACTCACGG GAGTCTGCAC AAAAATCGAT AAGAATCGGC ATTGGACCTT CACCCTAGTC GATATTACTT TGCTTAAGCA AAAGCAAGCT GAGCTAGATG AGGCGAGATT AATAGCAGAA TCAGCAACCG AGGCCAAGTC TCGCTTTCTT GCCATGATGA GCCATGAGAT CCGTACGCCT ATTAGCGGGA TCCTGAGCCT ACTGGAATTA ATGGTTCCAC ACATCAACAC ACATGAGATC AGTGGCATAC ATAAAAATCT GACTCATTCT GGTAATAACT TGCTCAACAT CGTTAATGAT GTTCTCGATT TCTCAAAAAT CGAAGCGGGC AAGCTCGGAT TAAGCCCCGC TGTATGCCAA CTTAGCAGTT TTATTTGTGA ATTAGCCCAG CCTCACATTG TCCATGTCGA GCGTAAAGGT ATTAAATTTA AGCTCTGGCT CGACCCTAAG CTAGCGTATT CACTAACCCT AGATCATTTG CGCCTAAAAC AGGTGCTAAA CAACCTACTC AATAACGCTT CGAAGTTTAC AACCGAGGGA GAGATCTGGT TATCGGTCGA TCTCATATCT TCAACAGACA CAGAGCAAAC TATTGGTTTT GCCGTTACCG ATACAGGCAT AGGAATTAGT GAAAAAGATA TCACTAAACT CTTTATTCCC TTTGAACAAG TCGATCTCAG TAGCGAGCGC CGTTTCAGCG GTACAGGTCT AGGCCTATCT ATCTGTGAGC AGTTAGTCAA ATTGATGGGA GGAGAGATCT CTGTCACCAG TACCCAAGGC CAAGGCAGTA CTTTTCGCTT TAGCCTGAGC TTCCCTATTG CAGCAGTTGA AGTGCCCGCT ATTGTCAATA AGCGCTGTGG CGTAATGATG CTTGATGACA GCGACTATGA TGTGGTCTGT GAATACCTTA GAGCCTGGCA ATCGACTCCT TATAACTTGC ATTGTATCGA CAATAAAGCC GCCCTCGCAG CATACGCTGC CAAGGCGCAA TTGCAGGTCA TACTGTTGCC AGAAAGTTGG TGTGAACAAC AAGCACTAAC GCCAAGTTGG GCTAAACGCA ACCTTGCTAA TGTGCAGATT ATTCAATTTA GAAGCCAGAG TATGCTCTCA GCAACTCCAA CAGAACTTGG CTGGGTACTA TCGGTCAACC CAATCATCCC TGAGCACTTG CTGCATCTCA TCACTAATCC AGAGGTTTTT GAGACCAAGT ATGCAGTGAC AGAGCCTAAA GTCGAACAGC AACTCACTCG CGAGCAGGCT ATCAGCCAAA ATAAGCTTAT TCTCGTTGCG GAAGATCACC CTATTAATCA GGATGTTATT CAGATGCAGC TGAATAAATT AGGCTACTTT AGCGATATTT TTGACGACGG CCAGCAAGCG TTGACGGCCT ATAAACAGAA TAAATACAAC CTCGTTTTGA CCGACTGCCA CATGCCTGAA CTCGATGGCT ATGGTCTAGT GAGTGCCATT AGAGAGCATG AACAACAAGA AAAACTAACC CGCCTCGCAG TTATCGCCCT CACGGCCAAT GCGATTTCGA GTGAGAAAGC CCGTTGCCAT CAATTTGGCT TCGATGACTA CTTAATAAAA CCGGTAACCC TAGAGCAACT GCAACGAGTG CTTAGTGAAC ACTTAGTGAT GACTCAGTCT TCCTCAAACA GTAATGAGAT GCGCACTGAT GGGATGCTGC GTGAGCCGCC TTTACCAGCC ACTCTGACTA ACTTAGCAAT AGATCGAATA GATGCGAGCA TGTCCAATGT TATCGATATC GATGCACTAG AAGCCAATTT CGGCGACCGA CAGCTTTGCA TCAATTTACT GAGTAAATTT ATCATCACCA GCAAGGATGA CATTCAGCTA CTAAGCCAAG CAATTACCGA ACAAAACTTT GAAATGACAG CCCATATTGC TCATAAGTTC AAAGGCGCCG CTGGGGTAAT TGAGTGTGAA CGGCTCGTTG CGACTTGCTC CAACATAGAA ACGGCGGCTT CGACTCAAGA TATTAAAGTA TTAAAGGAAT ATCTTGTACA GATAGAACAA TTAATAGAGC AGATCTCTAA TCAGGTAAAC CAGTTAACAT GA
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Protein sequence | MRQALLILIL FSLSFSAIAG QAKNDTAAAT EGRVVRVGYP AADWQPFTYV SKDGKVIGLL PSILQEITIN TGYRTENVIY PNYEEVTQAL RQGEIDIIMG VSKTPSRLTW LSFSSPLMLV PIAGITNQKN INNLLELKGQ RIAAEKGFAI NEQLRSSASQ VEVHSAPDSL AAYKSVLTGS SDAYIGNAIT LDYLHTHQDA PNELSIRLLA DVPFERLHLA SQLKDTELVN QLNEGLKQIP SETFKKLYDA WLTTSQVKYI YQQHSLNLTE EEIVTISEKK IIKVLYSTDN YPYSFINGKG AMDGMGPELL KIAAQKLNIT IEATPFNGND IEGHLASNSF EIIPSYTCDH NILQLIHCTS PYIQDRLIGV AASNLTSAQL ENSTKLGLLR RHKQQMNTSK DFPDADITYF ASTKLLINAV IKGQIQVGII PLSKANSLVS SKYLGRINII PNPLGKQTHP VSFGVNKNNP ILLSILNKAK NSIQEDELRT IINKWHDINI NSDFTFAKVP NWLLLVLGGV FSTFLAIAYS NRKLKNEIAQ RHSIEKELRL VNSNFGGIVA QLVRYGDDVN DISWSYVSGN IEKYLGLTPE QLYQTPQLLL EFLQTHADDH EFLNDIQQSH LSDSLYTTLK LNIDGKLSWF QLTGVCTKID KNRHWTFTLV DITLLKQKQA ELDEARLIAE SATEAKSRFL AMMSHEIRTP ISGILSLLEL MVPHINTHEI SGIHKNLTHS GNNLLNIVND VLDFSKIEAG KLGLSPAVCQ LSSFICELAQ PHIVHVERKG IKFKLWLDPK LAYSLTLDHL RLKQVLNNLL NNASKFTTEG EIWLSVDLIS STDTEQTIGF AVTDTGIGIS EKDITKLFIP FEQVDLSSER RFSGTGLGLS ICEQLVKLMG GEISVTSTQG QGSTFRFSLS FPIAAVEVPA IVNKRCGVMM LDDSDYDVVC EYLRAWQSTP YNLHCIDNKA ALAAYAAKAQ LQVILLPESW CEQQALTPSW AKRNLANVQI IQFRSQSMLS ATPTELGWVL SVNPIIPEHL LHLITNPEVF ETKYAVTEPK VEQQLTREQA ISQNKLILVA EDHPINQDVI QMQLNKLGYF SDIFDDGQQA LTAYKQNKYN LVLTDCHMPE LDGYGLVSAI REHEQQEKLT RLAVIALTAN AISSEKARCH QFGFDDYLIK PVTLEQLQRV LSEHLVMTQS SSNSNEMRTD GMLREPPLPA TLTNLAIDRI DASMSNVIDI DALEANFGDR QLCINLLSKF IITSKDDIQL LSQAITEQNF EMTAHIAHKF KGAAGVIECE RLVATCSNIE TAASTQDIKV LKEYLVQIEQ LIEQISNQVN QLT
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