Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0890 |
Symbol | |
ID | 5661289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1086771 |
End bp | 1087370 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641235435 |
Product | GPR1/FUN34/yaaH family protein |
Protein accession | YP_001500752 |
Protein GI | 157960718 |
COG category | [S] Function unknown |
COG ID | [COG1584] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.400956 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTACAC AACTAGCTAA TCCTGCTCCA TTAGGTCTAA TGGGATTCGG TATGACAACT GTCTTACTAA ACATCCATAA CGCAGGTTTT TTCCCAATTG ACTCTATGAT TTTGGCAATG GGAATTTTCT ACGGCGGTAT CGCTCAGGTT ATCGTTGGTA TCATGTGCTT TAAGCGTGGT GATACTTTCG GTACAACTGC ATTTACTTCT TACGGTTTAT TCTGGCTAAC CCTAGTAGGC CTGTTGGTTA TGCCTAAGAT GGGCTTTGCT GCAAGCCCAG CCACTTTCAT GGGTTGGTAC TTGCTACTAT GGGGCATGTT TACTGCTGCT CTTTTTGTTG GTTCACTACG TTACCCACGT GCTAAGCAAG TTGTGTTTGC ATCGTTAACG ATTCTATTCT TCCTACTTGC TGCGCGTGAT TTCACAGGTA GTGAGTTGAT CGGCACTATC GCTGGCTACG AAGGTATTTT CTGTGGTTTA AGCGCGATTT ACTTTGCTAT GGCACAAGTA TTGAACGCTG AGTTTGGTCG CGTTATTTTA CCAGTTGGTC CTGTTGCAGT TGCAGCATAC GAGCCAGCAG CAGAAAAACA AGCCGCTTAA
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Protein sequence | MSTQLANPAP LGLMGFGMTT VLLNIHNAGF FPIDSMILAM GIFYGGIAQV IVGIMCFKRG DTFGTTAFTS YGLFWLTLVG LLVMPKMGFA ASPATFMGWY LLLWGMFTAA LFVGSLRYPR AKQVVFASLT ILFFLLAARD FTGSELIGTI AGYEGIFCGL SAIYFAMAQV LNAEFGRVIL PVGPVAVAAY EPAAEKQAA
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