| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0877 |
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| Symbol | |
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| ID | 5661276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1075908 |
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| End bp | 1077176 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641235422 |
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| Product | histidine kinase |
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| Protein accession | YP_001500739 |
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| Protein GI | 157960705 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000773434 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACGTC TTTTTATTAG CCTCTATCTT CTGCTCAGCC TTGGCTTTTT AGGCATCGGC
TGGACTCTGG ATAATTTGTG GCAAAACAAT GTTGACGAAA AAGGTGCACT CGATGCACCT
TTAGTCGCTT TAGCGCAAGT ATTAGCGGCC CTCCCTCCAG CCGAACGTCA GGCGATGCTA
GATTCCATCG AAGCCGACCC GGACTTTGCT CTTACCCTAC TCGATTCTGA TCAGGTGGCA
TTTTCAAGCG AACAACTCGT TCAAGCCAAT AAAGTGATTG CGACCCCCTA TGATATCAAC
CACGAGCTGC AATTTGTGGC TGTGGGTGAG CAAGTTTTAA TGGCTGGCCC TATAGCGATT
GACCCTGCAG CCAGTTTAAG AAATATCTAC AATATCTTTT TCTATCTGTT GCTAGCGTTT
ATTGCACTCA TTTGGGTCTG GCCATTATCT AAAGATCTTA AAACCTTACG TAAGGCCACC
AAGGAGTTTG GCCAAGCCAA TTGGAACACT CGAATAAAGT TACCCAAACG CTCGCAAGTA
TTGCCGTTAG CAAATACCTT TAACGATATG GCTGCTCATA TCAGTGCGCT TATCGAAAAT
CAGAAGCATC TCTCTAATGC CGTTTCACAC GAAATCCGCA CCCCATTAGC GCGGCTTAAA
TTCGCCTTAG CCCTATTACC TCAGTACTGT CAGCCAAATT CTGATGAGGC AAATCGTCAG
CGCTTTTTAG ATGAGATGAA GCTCGATATC AAAGAGATGG AAAACCTGCT ACAAGAGTTA
CTCACATATG CCAGTCTCGA GACTCAGAGG GAGTCACTCA ACTTTGAGCG CTGTGATTTA
AACAGCCTAG TCGCACAAAC GATAAGACGA CTCCAAAGCC ACAATCCGAC TCCTATCGTG
CTCGATAAAC CAGAGGAAAC GATCTACCTA ATCGCCGAGC CATCGCTGGT CGAGCGTGCA
CTACAGAATC TCATCACTAA CGCTCAAAGG TTCTCGACTG ACGATATTAA AGTCAAAATA
TCTCAAGATA CAGACGGGAT AAGGCTGTCA GTTACCGATC ACGGTGAGGG GATTTTAGAG
GAAGATCAGA GCAAGATATT TGAGCCATTT TATCGCAGTA GCAGCAGTAA AAATGGTAAT
AAGGGTCACG GCTTAGGCTT AGCAATAATC AAGCGGATCA TGGACAGACA CCATGCCGAG
GTCAGTTTAC AAAGCCGGCC TGGCTTTACT CAATTTACCT TATTCTGGCC TAAGACAAAG
GAAGATTAA
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| Protein sequence | MKRLFISLYL LLSLGFLGIG WTLDNLWQNN VDEKGALDAP LVALAQVLAA LPPAERQAML
DSIEADPDFA LTLLDSDQVA FSSEQLVQAN KVIATPYDIN HELQFVAVGE QVLMAGPIAI
DPAASLRNIY NIFFYLLLAF IALIWVWPLS KDLKTLRKAT KEFGQANWNT RIKLPKRSQV
LPLANTFNDM AAHISALIEN QKHLSNAVSH EIRTPLARLK FALALLPQYC QPNSDEANRQ
RFLDEMKLDI KEMENLLQEL LTYASLETQR ESLNFERCDL NSLVAQTIRR LQSHNPTPIV
LDKPEETIYL IAEPSLVERA LQNLITNAQR FSTDDIKVKI SQDTDGIRLS VTDHGEGILE
EDQSKIFEPF YRSSSSKNGN KGHGLGLAII KRIMDRHHAE VSLQSRPGFT QFTLFWPKTK
ED
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