Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0839 |
Symbol | |
ID | 5661238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1039157 |
End bp | 1040929 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641235384 |
Product | ABC transporter related |
Protein accession | YP_001500701 |
Protein GI | 157960667 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000691959 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCCCT CTTTATATTT CGATGGTCCA ATTGGTAAAT TAAATTGGCA TGTGCTGCGC ATGTTATGGC CTTATCTGAT CGAGTTTAAA CAAAGAGTCG GCTTGGCCTT GCTATGCCTG GTTATTGCAA AATTGGCCAG CGTAAGCCTG CCGTTTGTTC TTAAAGATCT GGTTGATGGT CTCTCTAACT CATCTGCCAA GGAGCTGATC TCAGTTCCCA TCTCTTTAGT CATTGCCTAT GGTTGTATAC GCTTACTGAA CACCATTATT TCAGAGGTGA GAGATACGCT ATTTGGTCGA GTGACAGAGC GAGCTATCCG CCGTTTAGGG ATGGCGGTGT TTGAACATCT GCATCGTTTG GATATGGCGT TTCATTTAGA GCGCAGAACC GGTGGGCTAT CGCGAGATAT CGAGCGCGGT ACCAGTGGCA TGAGCTTCTT GATGCGCTTT ATGGTGTTTA ACATAGTGCC GACAATTCTC GAAATCATTC TGGTCGTGGG GATCTTATTT TATAACTACG GCTATGCCTT TGCCGGTGTG ACGCTGATTT CCGTGATGGC CTACGGGGCT TATTCGATCG TAGCTACCGA ATGGCGTACT GGCTATGTAC GTGATGCAGC TAAAGCCGAC TCGGTCTCTA GTACCCGAGC TATCGATAGT TTGCTTAACT ATGAAACGGT TAAGTATTTC AATAATGAAC AGTATGAAGC TAAACAGTAT GATGTGGCTT TAGCGCAATG GGAGGAGGCT AAGCGTAAGA ACCGGCTTTC CTTGTTTGCA TTAAATGCGG GTCAGGCTTG TATCATCTCG GTGGCGATGA CATTGATGTT AGGTATGGCA GCGTATGACG TGGTACAAGG CGAGATGACC ATAGGTGATT TTGTATTGAT CAATGCCTTT ATGATGCAGC TATTTATTCC ACTTAATTTT TTAGGCTTTG TCTATCGAGA GATCCGCGGG GCCTTTGCCA ATATCGAGAG GATGTTTGAT CTATTGGAGA AAGTACCTTC GATTCAAGAC TCGGCTGGCG CGAGTAATCA GCTATTGAGT CAAGGTAGGG TGTCATTTGA GCATGTGGGA TTTAGTTACG ACTCAAGAAA GATTTTAAAT GATGTCAGCT TTACTATAGA GACGGGCCAA AAAGTAGCAA TCGTTGGTGA TAGTGGCGCG GGGAAGTCGA CACTGGTTAA GCTATTATTT CGTTTTTATG ATGTGGGCGA TGGGCGGATC TGTATCGATG GCCATGATAT TCGCGCCTTG ACACAGAGCT GTTTACGCCA AGCCATAGCG ATAGTACCTC AAGATACAGT GCTGTTTAAC GATACCTTGA TAGAAAATAT TCGTTATGGC CGCCCAGAGG CTACCCGAGA AGAGATAGAT GCTGCGATTA AGATGGCACA CCTTAGCCAA TTTATTGAGA GTCTACCTGA AGGCGGGGAA ACGAAAGTTG GCGAACGAGG CCTAAAGTTG TCCGGTGGTG AAAAGCAACG AGTCGCGATT GCGAGAGCTA TCTTGAAGAA GTCCCCCATC TTAGTTTTCG ATGAGGCGAC TTCATCTTTA GACAGCCATT CTGAACAGGC AATTTTAACG GCCTTAAAGG AGGTGGCAAA AGGCCATACT AGCTTAGTGA TAGCGCATCG ACTCTCGACT GTTGTCGATG CCGACCGTAT CATAGTCTTG AGTAAGGGCA GAGTCGTCGA AACGGGTAAC CATAGTGAGT TACTCGCTGC GAAAGGCTTC TATGCCAATC TTTGGCGTGT GCAGCAGGAG TAA
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Protein sequence | MRPSLYFDGP IGKLNWHVLR MLWPYLIEFK QRVGLALLCL VIAKLASVSL PFVLKDLVDG LSNSSAKELI SVPISLVIAY GCIRLLNTII SEVRDTLFGR VTERAIRRLG MAVFEHLHRL DMAFHLERRT GGLSRDIERG TSGMSFLMRF MVFNIVPTIL EIILVVGILF YNYGYAFAGV TLISVMAYGA YSIVATEWRT GYVRDAAKAD SVSSTRAIDS LLNYETVKYF NNEQYEAKQY DVALAQWEEA KRKNRLSLFA LNAGQACIIS VAMTLMLGMA AYDVVQGEMT IGDFVLINAF MMQLFIPLNF LGFVYREIRG AFANIERMFD LLEKVPSIQD SAGASNQLLS QGRVSFEHVG FSYDSRKILN DVSFTIETGQ KVAIVGDSGA GKSTLVKLLF RFYDVGDGRI CIDGHDIRAL TQSCLRQAIA IVPQDTVLFN DTLIENIRYG RPEATREEID AAIKMAHLSQ FIESLPEGGE TKVGERGLKL SGGEKQRVAI ARAILKKSPI LVFDEATSSL DSHSEQAILT ALKEVAKGHT SLVIAHRLST VVDADRIIVL SKGRVVETGN HSELLAAKGF YANLWRVQQE
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