Gene Spea_0815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0815 
Symbol 
ID5661214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp1012326 
End bp1012940 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content49% 
IMG OID641235360 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001500677 
Protein GI157960643 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTAG ACACTTGGCT TATTTATCTC GTTGCTGTTA TCGGTCTGTC GCTCGCCCCC 
GGGCCCAATG GACTGCTGGC CTTAACTCAC GGGGTAATGT ATGGGCATAG AAAGACACTT 
TTTACCATTA GCGGCGGTGT GCTGGGTTTT GTTGTGTTGA TCGCTCTGGC TATGTTTGGC 
ATCGGTGCAT TACTGCTTGC CTCAACGGAT CTGCTATTAG TCTTTAAGTG GATAGGCGGC 
ATATACCTTA TTTGGCTGGG TATACGCATT TGGCGCTCCC CTGCAATAGC GTTGCAGCCC 
GTAGGTAAGG CGGTGGCTGT GAGTCAGTTT GGGCTTTTTA GACAAGGCGC GTTAGCGGCC 
ATAACCAACC CTAAGGTGCT GTTATTTTTT GGTGCCTTCT TGCCTCAATT TATCGATCCA 
GAAAAGTCAT TACTCAGCCA GTTTATGGTG ATGGCTGCGA CATTCGCGGT GGTCGAATTT 
GTTGTCGAAT ACTTGATCGC CAGAGTCGCG ACTAAACTTA GACCATGGCT TGCTCGCAGT 
GGTAAGCGCT TCAATCAATG TTGTGGTGGA ATGTTCGCGC TGATTGGCGC CAGCTTACCC 
TTGTACAATA ATTAA
 
Protein sequence
MALDTWLIYL VAVIGLSLAP GPNGLLALTH GVMYGHRKTL FTISGGVLGF VVLIALAMFG 
IGALLLASTD LLLVFKWIGG IYLIWLGIRI WRSPAIALQP VGKAVAVSQF GLFRQGALAA 
ITNPKVLLFF GAFLPQFIDP EKSLLSQFMV MAATFAVVEF VVEYLIARVA TKLRPWLARS 
GKRFNQCCGG MFALIGASLP LYNN