Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0814 |
Symbol | |
ID | 5661213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 1011167 |
End bp | 1012198 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641235359 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001500676 |
Protein GI | 157960642 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCATT CAAATATCGA AAACGCAGCC GCAAACGGCC AAGTTAACGC CCCAGATGTA CGTTTTTTGC TACTGCCCTT ACCCGAATTT AGCATGCTGC CATTCGCAGG TTTTCTGGAT AAATTGCGCT TTTCTGCCGA CGAGGAGGAT TACAGTCAGC AGCAATATTG CAGCTGGCAG ATTGTCGGGT TAACGCCCTG CCACCAGCTA TCCAGCAGCG GTGTTTCAGT TGAACTAACA ACGACTGTGG ATGAGATTGA ATTAACCGAT TATGACTATT TAGTCGTGTT TGGCGGCCGT AGTGCCCGAA GCTGTCAGCA GCTACCCAAA CAGTATCAAG ATCTATTGCG CTTAGCCGCA GCGAAAGGAG TCACCTTAGT CAGTATTGAT AATGCCTGCT TTCTGTTTGC CGCAGCAGGT TTACTTGATA ACCACAGTGT GGCGGTGCAC TGGCGCCACG TACAAGAGTT TCGCACCGCC TTTCCACGAA TCGACATCCG CACCGAACAG CTCTATTGCA TCGATAGGAA GCGGATCAGC TGCGCCGGAG GCAGTGCAGC TATCGATCTC GCTGTTGAGC TATTAGCCCG CCATTGCGGC CGGACAAAGG CACTCAAGGG GCTGGCGGAC ATGCTTGTGG ATGAAGCGAG AGAGCAAAGG CACCAACTCA AATCCCTCAA TACCAATATT CAAATAAACA ACACAGCAAG TCGCCACGTT GGTCGAGCTA TCAGCCTGAT GCGCCAATTA CTCGCCAGCT CTGACACAGT CGATGCACTG GCTGATAAAT TAGCGATAAG TCGCCGCCAA CTGGATAGAC AATTTAAAGA CTGTTTTGGG CAGACGGCTC ATGAATACTG GAGTGAAATG CGACTACAGC ACCTGCATTG GCGAGTGGTA AATTCCGACC ATAGCTTGCA ATATTTGGCT GACGAAGTGG GTATTCAGGA CGTGAGCTAT CTGTGTAAGC TGTTTCGCAA GCGCTTCGGT TGCAGTCCTA ATTCATTACG TAAGCCCAAG CTTTTCACCT AA
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Protein sequence | MSHSNIENAA ANGQVNAPDV RFLLLPLPEF SMLPFAGFLD KLRFSADEED YSQQQYCSWQ IVGLTPCHQL SSSGVSVELT TTVDEIELTD YDYLVVFGGR SARSCQQLPK QYQDLLRLAA AKGVTLVSID NACFLFAAAG LLDNHSVAVH WRHVQEFRTA FPRIDIRTEQ LYCIDRKRIS CAGGSAAIDL AVELLARHCG RTKALKGLAD MLVDEAREQR HQLKSLNTNI QINNTASRHV GRAISLMRQL LASSDTVDAL ADKLAISRRQ LDRQFKDCFG QTAHEYWSEM RLQHLHWRVV NSDHSLQYLA DEVGIQDVSY LCKLFRKRFG CSPNSLRKPK LFT
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